Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00884 ATGGACTTGAATCAGTTTTTAAGTTTCAGTGTGACTAGTTCGGCAGGAATCCCTAGCACATCGTCTTATACTCCTATTTCACCAATACCCAACCGGTTGCTTGGATCCTTGAAATTTGACATAGGAAACTCACCTAATTCTGCCCTTTCTACTCATTTTGATTCTGATACTCATTCTTCTGCATTAAGTGATAGTCAGGAACAGCACACCTCCGGGGAAATTCACTCTGGTGTCAACTCTTGCAACTCTTTGCAGGAAAGCAATCATTATTTGCATAGGCCAGTCTCATCTGTGGACCATCTCCAAGACGGTTTGCATCTATCTACTAGGAGCTTTCTTCCACAGGATGCAAGTTATGACCATGAAACCAGACATGCATTGCTGGAATTAGAAACTGCTTTGATGGCACCTGATCGTGAAGATCAAGTCACCACATCAAGCACTTCTTTGGGTGTTAGCAGCAGGCCAACAACATCTGGCCAAAGAAATAGGTCCTGGAGCCATGAGGGCCAGTCAAGTGATGTTGCACATGTAGAGAAGCGTCACAAATCAGTGGAGGATGTATCGCTGCAAGGATTCCCATCAAGCAATTTGAAACAATTGCTGATTGTATGTGCCAAAGCCTTGTCTGAAAACAACATGAAAGGTTTTGATCAGTTGATAGAAAAGGCTAGAAGTGCTGTGTCTATAACTGGGGAGCCAATCCAGCGCCTTGGTGCTTATTTGGTAGAAGGGCTTGTTGCAAGGAAGGAGGCATCGGGGAATAACATCTACCATGCCCTAAGATGCAGGGAGCCTGAGGGAAAAGACTTACTCTCTTACATGCAGCTACTGTATGAAATCTGTCCCTACTTAAAATTTGGTTACATGGCTGCAAATGGCGCTATTGCGGAAGCATGTAGGAATGAGGACCGCATTCATATCATAGACTTCCAGATTGGTCAGGGAACTCAATGGATGACACTTCTTCAAGCTCTTGCAGCAAGACCTGGTGGAGCCCCCCATGTACGGATCACAGGGATTGATGATCCCCTTTCTAAATATGTTCGTGGTGATGGATTGGAAGCCGTTGGGAAAAGGTTGGCTGCGATCTCTCAGACATTTAACATCCCAGTTGAGTTCCACGGTGTGCCTGTTTTGGCTCCAGATGTGACAAAAGACATGCTTGATGTTAGGCCTGGTGAGGCTTTGGCTGTGAACTTCCCTTTGCAACTCCATCATACGGCTGACGAAAGTGTTGATATGAGTAATCCAAGGGATGGACTTTTGAGATTGGTGAAATCACTTTCTCCCAAGGTAACTACATTGGTAGAGCAAGAGTCAAACACAAATACCACTCCTTTCTTCAACAGGTTTATAGAAACCTTGGATTACTACTTGGCAATGTTTGAGTCCATTGACGCGTCTCTTCCAAGAAAGAGCAAGGAGCGGATTAATGTGGAGCAACATTGTTTGGCTCGAGATATTGTCAACATTATTGCTTGTGAAGGGAAGGAAAGGGTAGAGAGACATGAGCTGTTAGGCAAGTGGAAGTCTAGGTTAACAATGGCTGGCTTTCGTCAATATCCTTTGAGTTCTTATGTGAATTCTGTCATAAGAAGCCTGCTGAGGTGCTATTCGGAACATTATAATCTTGTGGAGAAGGATGGGGCCATGCTGCTGGGATGGAAGGACAGAAATTTGATTTCAGCTTCAGCTTGGCATTGA 1707 0.4458 MDLNQFLSFSVTSSAGIPSTSSYTPISPIPNRLLGSLKFDIGNSPNSALSTHFDSDTHSSALSDSQEQHTSGEIHSGVNSCNSLQESNHYLHRPVSSVDHLQDGLHLSTRSFLPQDASYDHETRHALLELETALMAPDREDQVTTSSTSLGVSSRPTTSGQRNRSWSHEGQSSDVAHVEKRHKSVEDVSLQGFPSSNLKQLLIVCAKALSENNMKGFDQLIEKARSAVSITGEPIQRLGAYLVEGLVARKEASGNNIYHALRCREPEGKDLLSYMQLLYEICPYLKFGYMAANGAIAEACRNEDRIHIIDFQIGQGTQWMTLLQALAARPGGAPHVRITGIDDPLSKYVRGDGLEAVGKRLAAISQTFNIPVEFHGVPVLAPDVTKDMLDVRPGEALAVNFPLQLHHTADESVDMSNPRDGLLRLVKSLSPKVTTLVEQESNTNTTPFFNRFIETLDYYLAMFESIDASLPRKSKERINVEQHCLARDIVNIIACEGKERVERHELLGKWKSRLTMAGFRQYPLSSYVNSVIRSLLRCYSEHYNLVEKDGAMLLGWKDRNLISASAWH 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00884 568 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 154 564 IPR005202 -
Pumo11g00884 568 MobiDBLite consensus disorder prediction 50 81 - -
Pumo11g00884 568 Pfam GRAS domain family 198 567 IPR005202 -
Pumo11g00884 568 MobiDBLite consensus disorder prediction 139 172 - -
Pumo11g00884 568 MobiDBLite consensus disorder prediction 137 176 - -
Pumo11g00884 568 ProSiteProfiles GRAS family profile. 189 568 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00884 Pumo-Chr11 32727503 32730826 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00884 121 567 GRAS Transcription Factor Family AT5G48150 56.696 6.38e-180 514
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pumo11g00884 GRAS 1.2e-129 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00884 - - gmx:100775665 1064.29