Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00871 ATGGAAGAAGTGCAGAGATGGAGGGCAGCTCTGACCCATGTGGCCAATTTCTCTGGCTGGGATATCCGAAATAAGCCACAATCTGTACAGATTGAAGAAATTGTTCAAAAAGTAAAAAATATATTGGGTCCCAAATTTTCAAATCTTCCAAATGGTAATCTAGTTGGGATGGAATCCCATCTTGAAGAATTAGAAAAGTGTTTAAGATTGGAGTCGGATAATGATGTTCGAGTTATCGGAATTAGTGGGATGGGTGGAATAGGAAAGTCAACTCTTGCCCGTGCTTTATACGAAAAAATGGCTCTTCAATATGATTTTCATTGTTTTATTGATGTAAGAGAAAATTATCGTTGTTTTGGTACATTAGGTGTACAAAAACAATTACTTTCTCAGTCTCTAATAGAAAAAAAATATAGAGATTTGCAATGTTTTTTATGGAACATATTCGATATGGACTAG 459 0.3508 MEEVQRWRAALTHVANFSGWDIRNKPQSVQIEEIVQKVKNILGPKFSNLPNGNLVGMESHLEELEKCLRLESDNDVRVIGISGMGGIGKSTLARALYEKMALQYDFHCFIDVRENYRCFGTLGVQKQLLSQSLIEKKYRDLQCFLWNIFDMD 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00871 152 Gene3D - 45 144 IPR027417 -
Pumo11g00871 152 Gene3D - 1 44 IPR035897 -
Pumo11g00871 152 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 4 136 IPR044974 GO:0006952
Pumo11g00871 152 Pfam NB-ARC domain 58 123 IPR002182 GO:0043531
Pumo11g00871 152 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 38 135 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00871 Pumo-Chr11 32245978 32246700 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00871 2 133 WRKY Transcription Factor Family AT4G12020 32.836 1.18e-14 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00871 - - gmx:100814717 186.422