Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00870 ATGAGTGATTATGAACAACTGACACGTGCTTTTCTATACCATGCTCAAGGCCATCCCTTGGCAATTAAAGTAATAGGATCATCTTTGTTTGGTAAAAATGTGTCAGAGTGGAATGGAACATTGGCTAGTCTAAGAGACAATAGAAGTAGAAAAATTATGGATGTGCTGCAAGTAAGTTATAATGATCTGGATGAAAGAGACAAGGAAATATTTCTAGATATTGCTTGCTTCTTCGATATACCAAATTTCAAACAATATGTGGAAGAGGTTCTAGATTTTCGTGGATTTCATCCTGAAATTGGCCTACCAGTTCTTGTTGATAAATCACTCATAACCATTACTGAAAACTTTATTCATATGCATCACTTGTTGAGAGAAATGGGCAAGAGTATTGTTCAAGAAAAATCACCTAAAGAGCCAAGAAAGTGGAGCAGGTTGTGGGATTATAAAGATCTCTACAAAGTTATGTCTGACAATATGGAAGCAGAAAATCTTGAAGGCATAGTTGTTGAAAAAGTTCCAGAGAGGTTTCATGAAACAACAATGAGAGTTGATGCTCTATCAAAAATGAGAAACCTTAAGTTGCTCATACTTCCCAACTATGTGAATTTTTCAGGAAGCCTCAACTATCTTTCCAATGAATTAGGATATCTTACTTGGAAAAAATATCCCTTCAAGTATTTGCCTCCATGTTTTCAGCCACAAAAACTTGTTCAGTTGTTCTTTCGTGAGAGTAGCATCAAGCAATTATGGGAAGGCACACAGGTAGGTAGTGTAAATTTGTATGCTTTTTTTATTTTCATTTTCTTTAAATGA 816 0.3505 MSDYEQLTRAFLYHAQGHPLAIKVIGSSLFGKNVSEWNGTLASLRDNRSRKIMDVLQVSYNDLDERDKEIFLDIACFFDIPNFKQYVEEVLDFRGFHPEIGLPVLVDKSLITITENFIHMHHLLREMGKSIVQEKSPKEPRKWSRLWDYKDLYKVMSDNMEAENLEGIVVEKVPERFHETTMRVDALSKMRNLKLLILPNYVNFSGSLNYLSNELGYLTWKKYPFKYLPPCFQPQKLVQLFFRESSIKQLWEGTQVGSVNLYAFFIFIFFK 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00870 271 SUPERFAMILY "Winged helix" DNA-binding domain 51 156 IPR036390 -
Pumo11g00870 271 Gene3D - 1 64 IPR042197 -
Pumo11g00870 271 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 74 IPR027417 -
Pumo11g00870 271 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 255 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00870 Pumo-Chr11 32244797 32245721 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00870 6 255 WRKY Transcription Factor Family AT5G45050 33.579 2.97e-39 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00870 - - gmx:100814717 371.318