Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00865 ATGGCTACTGAAAAGCTTGGATGTTGTGCAAAATTTTTTGCAAGCTCTAAACCCCACTTGGCCATGATCTCTTTACAATTTGGCTATGCTGGCATGAACATTATCACTAAGGTTTCCCTCAACCAAGGCATGAGCTACTATGTCCTAGTGGTTTATCGCCATGCCTTCGGCACCGCCGCCATCGCTCCTTTTGCCTTTATTTTGAAAGGTCAACCAAAGATAACATTCCCAGTTTTCATGCAAATTTTTATCCTAGCTCTTCTCGGGCCTGTGATTGATCAAAATTTCTACTATGCTGGGTTGAAGCTCACATCCCCAACCTTCTCATGTGCAATGAGCAACATGCTTCCAGCCTTGACTTTTGTGATGGCAGTGTTTTGCTGGATGGAGAAGATAGACATAAAGAAGGTGAGATGCATAGCAAAGATAGTGGGAACATTAGTGACAGTGGCAGGGGCTATGCTGATGACATTATACAGAGGTCCAATAGTGGAGATGGTATGGGCCAAACATCCACACAATAAGACCAATGCAACAGCCACCACAGGATCATTGGACAAAGATTGGCTCTTAGGCTGCATCTTTCTCATCATTGCCACCCTTGCTTGGGCTTCCCTCTTTGTTTTACAAGCCAAAGCTATACAAACGTACAAGAATCATCAGCTAAGCCTAACTTCACTAGTGTGCTTTATAGGCACTCTTCAAGCTATTGCTGTTACTTTTGTTGTTGAACACAATCCTTCTGTTTGGAGAATTGGCTGGGATATGAACTTACTTGCAGCTGCATATGCTGGGATTGTGACATCAAGCATATCATACTATGTACAAGGACTGGTAATTAAGAAGAAATGGCCTGGCTTTGCAACTGCCTTTAGCCCTTTAATGATGATCATTGTTGCCATCATGGGGTCCTTTATCCTTGCAGAACAAAGTTATCTTGGAGGTGTGATTGGTGCCATCTTAATTGTTATAGGTTTGTACTCAGTTCTGTGGGGAAAGCACAAAGAACAAATAGAGAGCAAAGTGGCAGATGAAATTCCCTTGCCTGTAAAGGATGCTCAAATTGCTGTAATTGCAGGGCCAATGATTGATGCCACTGATAATTTTACTGAAGAAAAATATGGTCAGAAAGGAGAAGCCAACAATAAGCTCTCTTCACTCGTAATAACTATGCCTATTCCAGAGCCTCCCACGAAAGCTAAGGCTTAA 1209 0.4251 MATEKLGCCAKFFASSKPHLAMISLQFGYAGMNIITKVSLNQGMSYYVLVVYRHAFGTAAIAPFAFILKGQPKITFPVFMQIFILALLGPVIDQNFYYAGLKLTSPTFSCAMSNMLPALTFVMAVFCWMEKIDIKKVRCIAKIVGTLVTVAGAMLMTLYRGPIVEMVWAKHPHNKTNATATTGSLDKDWLLGCIFLIIATLAWASLFVLQAKAIQTYKNHQLSLTSLVCFIGTLQAIAVTFVVEHNPSVWRIGWDMNLLAAAYAGIVTSSISYYVQGLVIKKKWPGFATAFSPLMMIIVAIMGSFILAEQSYLGGVIGAILIVIGLYSVLWGKHKEQIESKVADEIPLPVKDAQIAVIAGPMIDATDNFTEEKYGQKGEANNKLSSLVITMPIPEPPTKAKA 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00865 402 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 158 - -
Pumo11g00865 402 SUPERFAMILY Multidrug resistance efflux transporter EmrE 237 335 - -
Pumo11g00865 402 PANTHER WAT1-RELATED PROTEIN 18 340 IPR030184 GO:0016020|GO:0022857
Pumo11g00865 402 Pfam EamA-like transporter family 191 330 IPR000620 GO:0016020
Pumo11g00865 402 Pfam EamA-like transporter family 20 156 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00865 Pumo-Chr11 32183984 32186697 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00865 1 399 Nodulin-like Gene Family AT5G07050 63.592 0.0 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00865 - - gmx:100804390 731.865