Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00852 ATGTCTGGTCCAAACAGGTTGCAGGTAACATGTTCGATTCGTCAAAATGCTTTCAAATGTAACTATATTATGAGTGATTATGAACAACTGACACATGATGTTCTATACCATGCTCAAGGCCATCCCTTGGCAATTAAAGTAATAGGATCATCTTTGTTTGGTAAAAATGTCTTAGAGTGGAATGGAACATTGGCTAGTCTAAGAGACAATAGAAGTAGAAAAATTATGGATGTGCTGCGAGTAAGTTATAATGATCTGGATGAAAGAGACAAGGAAATATTTCTAGATATTGCTTGCTTCTTCGATATACCAAATTTCAAACAATATGTGGAAGAGGTTCTAGATTTTCGTGGATTTCATCCTGAAATTGGCCTACCAGTTCTTGTTGATAAGTCACTCATAACCATTACTGAACGCTTTATTCATATGCATCGCTTGTTAAGAGAAATGGGCAAGAGTATTGTTCAAGAAAAATCACCTAAAGAGCCAAGAAAGTGGAGTAGGTTGTGGGATTATAAAGATCTCTACAAAGTTATGTCTGACAATATGGAAGCAGAAAATCTTGAAGGCATAGTTGTTGAAAATGTTCCAGAGAGGTTTCGTGAAACAACAATGAGAGCTGATGCTCTGTCAAAAATGAGAAACCTTAAGTTGCTCATACTTCCCGACTATGTGAATTTTTCAGGAAGCCTCAACTATCTTTCCAATGAATTAGGATATCTTACTTGGATAAAATATCCCTTCAAGTATTTGCCTCCATGTTTTCCGCCGCAAAAACTTGTTCAGTTGTTCCTTCGTGAGAGTAGCATCAAGCAATTATGGGAAGGCACACAGCCTCTACCCAATTTAAGACGTTTGTATCTCATTAACTGCAAAAGTCTAATTGAGGTGCCAAATTTTGGTGAGGCCCTAAATCTTGAGAGTCTACAACTCCAAGGATGTATACGACTCAGGCCATTCCATCTATCCATTGGTTTTCCTAGAAATCTTACTCTGCTGAATTTGGAAGGCTGTGAAAGTCTTGTAGAGATACCACATTTTGTAGAGGCTATAAATCTTGAAACGTTAAATCTACAAGGATGTATACAACTTAGGCAGATACACCCATCCATTGGTCTTCTAAGAAAGCTAACTGTGTTAAATTTGGAAGGCTGCAGAAGTCTTATCAACTTACCACCTTTTGTAGAGGCCATAAATCTTAAAACGTTAAATCTCAAAGGATGTACAAAACTTAGGCAGATACACCCATCCATTGGTCATCTAAGAAAGCTTACTGTTTTAAATTTGAAAGATTGCAAAAGTCTAGTAAGCTTACCGAACAGCATATTGGGACTCAGTTCTCTTGAATACCTATGTCTTTCCGGGTGTTCAAAACTGTATAACATCCATTTATCAGAAGAACCAAGGGATGCTAGGCATTTGAAGAAGCTTTGTATAGGTGAAGCTCCTAGTCGTTCCCAATCAATATCCTCATTCCTCAAAAAGTGGCTTCCGTGGCCTTTCGTGGGATTCGTCAAAAGCTTTGAGGATGGACATAAAGATTCAGTTAGTTGTTTGTTGCCTTCCTTGCCTATTTTCTCATGTATGCGTAAACTTGATCTAAGTTTCTGCAATTTACTTAAAATCCCTGATGCTTTTGGACATTTCCATTGCTTAGAAAACCTATGTTTAAGGGGAAACAATTTTGATACTCTGCCCAGCCTCAAGGAGCTTTCCAAATTGTTACATTTAAACTTACAACACTGCAAGCGATTGAAATATTTGCCTGAGCTCCCTTCACGAACTGATTTGCAACCACCAGGATACGAGCTGTCAGCGGATATTATACAAGATCAATGTAATGAGTCAGAATCAGGAATAAATATTTTCAACTGCCCAGAATTAGATGAGAGGGATCGCTGCACCAGCATGTGTCTTTCATGGAATATGCAAATTGTTCAGGCGCTCCACAAATACAAACAACATCATCGGCGGTTCTGGCCTCCAGACATTTCAAGTATTATTCTAGGAAGTGAAATACCAAGGTGGTTCCACAAACAGCATGTGGGCATCGGCAATGTGATAAACATAGACACATCTCACTTTATGCAGCATGACAATAATTGTATAGGCATTGCGTGTAGTGTAATATTTGTGGTACATAAAGAAAGGAGAATGGGCCCTCCAGAAACAGAACGGCCTCCAGAAACAGAACCACATGACACTGTTGGTATTCCACTTCTATTCCGTAGAGATCTAGTCACGGATAAATCGGATCACATGTGGGTATTCTATTTCACTCGACCACCTTCCAATGAATATGGTGATGAGTTGAAATTGAGATTTATATTATGTGATGGTCATCAATATTTTGATCTTGAGGTGAAGAAGTATGGGTATCGTTGGGTATATGAAGAGGATCAGGAACTATCAAACTTAACAATGATGCACAGCAAAAATTCGTTGCCACAGAAGCGCAAGTTTTTGGCAATAGAAGAAAACAAGTAG 2487 0.3848 MSGPNRLQVTCSIRQNAFKCNYIMSDYEQLTHDVLYHAQGHPLAIKVIGSSLFGKNVLEWNGTLASLRDNRSRKIMDVLRVSYNDLDERDKEIFLDIACFFDIPNFKQYVEEVLDFRGFHPEIGLPVLVDKSLITITERFIHMHRLLREMGKSIVQEKSPKEPRKWSRLWDYKDLYKVMSDNMEAENLEGIVVENVPERFRETTMRADALSKMRNLKLLILPDYVNFSGSLNYLSNELGYLTWIKYPFKYLPPCFPPQKLVQLFLRESSIKQLWEGTQPLPNLRRLYLINCKSLIEVPNFGEALNLESLQLQGCIRLRPFHLSIGFPRNLTLLNLEGCESLVEIPHFVEAINLETLNLQGCIQLRQIHPSIGLLRKLTVLNLEGCRSLINLPPFVEAINLKTLNLKGCTKLRQIHPSIGHLRKLTVLNLKDCKSLVSLPNSILGLSSLEYLCLSGCSKLYNIHLSEEPRDARHLKKLCIGEAPSRSQSISSFLKKWLPWPFVGFVKSFEDGHKDSVSCLLPSLPIFSCMRKLDLSFCNLLKIPDAFGHFHCLENLCLRGNNFDTLPSLKELSKLLHLNLQHCKRLKYLPELPSRTDLQPPGYELSADIIQDQCNESESGINIFNCPELDERDRCTSMCLSWNMQIVQALHKYKQHHRRFWPPDISSIILGSEIPRWFHKQHVGIGNVINIDTSHFMQHDNNCIGIACSVIFVVHKERRMGPPETERPPETEPHDTVGIPLLFRRDLVTDKSDHMWVFYFTRPPSNEYGDELKLRFILCDGHQYFDLEVKKYGYRWVYEEDQELSNLTMMHSKNSLPQKRKFLAIEENK 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00852 828 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 376 616 IPR044974 GO:0006952
Pumo11g00852 828 SUPERFAMILY L domain-like 206 591 - -
Pumo11g00852 828 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 15 97 IPR027417 -
Pumo11g00852 828 PRINTS Disease resistance protein signature 38 52 - -
Pumo11g00852 828 PRINTS Disease resistance protein signature 419 435 - -
Pumo11g00852 828 SUPERFAMILY "Winged helix" DNA-binding domain 74 179 IPR036390 -
Pumo11g00852 828 Gene3D Ribonuclease Inhibitor 193 349 IPR032675 -
Pumo11g00852 828 Gene3D Ribonuclease Inhibitor 510 650 IPR032675 -
Pumo11g00852 828 Gene3D Ribonuclease Inhibitor 350 496 IPR032675 -
Pumo11g00852 828 Gene3D - 13 87 IPR042197 -
Pumo11g00852 828 ProSiteProfiles Leucine-rich repeat profile. 551 572 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00852 Pumo-Chr11 31306528 31309689 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00852 20 492 WRKY Transcription Factor Family AT5G45050 34.000 3.27e-59 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00852 - - gmx:100814717 1010.75