Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00851 ATGAAGCTGGCAGCGTCAATGAGGACTGACGAGGACAAAAATGCTATAAGTGTTGTGTCTGTAACTGGGGAGCCAATCCAATGCATTGGTGCTTATTTGGTAGAAGGGCAAGTTGCAATGAAGGAAGCGTTAAGGAATAACATCTACCAGGCCCTTAGGGGCAAAAAGCCTGTATGCAAAGACTTACTCTCTTACATGCAGCTATTGTATGAAATATGTCCCTACTTAAAATTTGGTTACATGGCTTCCAATGGCTCTATTGTTGAAGCATGTAGGAATAAGGACCACATTCATATCCTAGACTTTCAGATTGTTCAGGGAACTCAATGGATGACACTTCTTCGAGCTCTTATAGGAAGACCTAGTTGA 369 0.4201 MKLAASMRTDEDKNAISVVSVTGEPIQCIGAYLVEGQVAMKEALRNNIYQALRGKKPVCKDLLSYMQLLYEICPYLKFGYMASNGSIVEACRNKDHIHILDFQIVQGTQWMTLLRALIGRPS 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00851 122 ProSiteProfiles GRAS family profile. 1 122 IPR005202 -
Pumo11g00851 122 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 18 121 IPR005202 -
Pumo11g00851 122 Pfam GRAS domain family 19 121 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00851 Pumo-Chr11 31295850 31296864 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00851 18 121 GRAS Transcription Factor Family AT5G48150 55.238 3.97e-37 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pumo11g00851 GRAS 1.7e-23 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00851 - - gmx:100775665 165.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g00851 11 31295850 31296864 Pumo11g00851 11 31295850 31296864 ECH