Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00850 ATGGTCGAGGAGGCAGTGGCGGGTGTGCTCGAGGTTGGGGTCGAGGACATCGTCGCCGCGACGCTTGAGGGCGAGGGAGACATGGGTACCGACATTTTAAGAAAGCTTATTGTTGTGAATTTGAGAGATTGCAGAAGTTTAATCAAGTTACCACATTTTGGAGAGTGCCTAAATCTTGAATTTCTAGTTCTAGAAGGATGTATACAACTTAGGCAGATCCATCCATCCATTGGTCTTTTAAGAAAGCTTATTTCTATGAATTTGAGAAACTGCACAAGTTTAATAAAGTTACCACATTTTGGAGAGGGCCTAAATCTTGAAATTCTAGATCTGGAAGGATGTATGCAACTTAGGAAGATCCATCCATCCATTGGTGTTCTAAAAAAGCTTACTGTTTTTAATTTGAAAGATTGCAAAAATCTAGTAAGCTTACCCAACAGCATATTAGGCCTCAATTCTCTTAAATATCTGAGTCTCTCTGGCTGTTCAAAACTGTATAATAACCAGTTATTAGATGAACCAAGGGATGCAGAGCATTTGAAGAAGCCTTATATAAGTGAAGCGCCTAGTCATTCCCGATCAACATCGTCATCCATCAAAAGGTGGCTTTTGCAGCCTTTTCATTTGTTGAATTCCAGAGCACATAAAGATTCAGTTGGTTGTTTGTTGCCTTCCTCTCCTACTCTCCTATGTATGTGTGAACTTGATCTAAGTTTCTGCAATTTAGTTCAAATCCCTGATGTTATCGGAAATTTAAGTTGCTTAGAAAGTCTAGATCTAATGGGAAACAATTTTGCTACACTGCCCAACCTCAAGGAGCTTTCCAAACTGTATTATTTGAACTTACAGCACTGCAAGCAGTTGAAACATTTGCCTGAGCTCCCTTCACGAACTGACTTGATATCACAAACTTACATGCCTTGGCCACTTCAAATAGCTCAATTTGTTGAAAGAAAAGCAGGATTAAATATTTTCAACTGCCCAGAATTAGTTGAGAGGGAACGCTGCACTAGCATGACTCTTTCATGGTTGATACAAATTCTTCAGGCAGACTTCCCACACAAATGTGTTCAACACCCTAGGTTTGGTCCGAGCATTGAAAAACAAGGTTTCCCCATTATGATTTCGGTGGTTGTCAATGGAGATCTAGTGATGGATGAATCAGAATATATGTGGCTATTCTATTTCACTCGAGACGACTTGCTTCAAAAATATACTTTCTGGGGTTCACCTCCTCTTCCTATCTTCAATCTGGAAGTTGATGAATGGGACAACAAGCAAAGTTTACATTTTGAGGTGAAGAAATATGGGTATCGTTGGCCGTGTGATGGAGTTGCAACTCTGCCATCAGGCTTTTCTGGCGAGAGTGATGTGATGCAACATGTTGTGTGA 1392 0.403 MVEEAVAGVLEVGVEDIVAATLEGEGDMGTDILRKLIVVNLRDCRSLIKLPHFGECLNLEFLVLEGCIQLRQIHPSIGLLRKLISMNLRNCTSLIKLPHFGEGLNLEILDLEGCMQLRKIHPSIGVLKKLTVFNLKDCKNLVSLPNSILGLNSLKYLSLSGCSKLYNNQLLDEPRDAEHLKKPYISEAPSHSRSTSSSIKRWLLQPFHLLNSRAHKDSVGCLLPSSPTLLCMCELDLSFCNLVQIPDVIGNLSCLESLDLMGNNFATLPNLKELSKLYYLNLQHCKQLKHLPELPSRTDLISQTYMPWPLQIAQFVERKAGLNIFNCPELVERERCTSMTLSWLIQILQADFPHKCVQHPRFGPSIEKQGFPIMISVVVNGDLVMDESEYMWLFYFTRDDLLQKYTFWGSPPLPIFNLEVDEWDNKQSLHFEVKKYGYRWPCDGVATLPSGFSGESDVMQHVV 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00850 463 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 101 165 - -
Pumo11g00850 463 ProSiteProfiles Leucine-rich repeat profile. 254 275 IPR001611 GO:0005515
Pumo11g00850 463 SUPERFAMILY L domain-like 32 300 - -
Pumo11g00850 463 Gene3D Ribonuclease Inhibitor 221 341 IPR032675 -
Pumo11g00850 463 Gene3D Ribonuclease Inhibitor 31 181 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00850 Pumo-Chr11 31291405 31294198 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00850 80 258 WRKY Transcription Factor Family AT4G12020 36.000 4.50e-13 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00850 - - gmx:100814717 371.703