Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00837 ATGGTTAGAACCCCGTGCATAAGCAAAAGTGGACTGAAGAAAGGAACATGGACACCAGAGGAAGACAAGAAGTTAATCGCTTATATTACTAGATATGGCCACTGGAATTGGAGCCTACTCCCCAAGTTCGCAGGTCTTGCGAGATGTGGAAAGAGTTGTAGACTTAGGTGGATGAATTACCTAAGGCCAAACCTCAAAAGAGGGAACTACACTCAACAAGAGGAAGAAACTATTATCAAGCTGCACCGAAATCTGGGTAGCAGGTGTAAACCAATAAGTCATGCTATTCAATGA 294 0.432 MVRTPCISKSGLKKGTWTPEEDKKLIAYITRYGHWNWSLLPKFAGLARCGKSCRLRWMNYLRPNLKRGNYTQQEEETIIKLHRNLGSRCKPISHAIQ 97
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00837 97 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Pumo11g00837 97 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 92 - -
Pumo11g00837 97 SUPERFAMILY Homeodomain-like 15 89 IPR009057 -
Pumo11g00837 97 FunFam MYB-related transcription factor 13 66 - -
Pumo11g00837 97 CDD SANT 16 61 IPR001005 -
Pumo11g00837 97 Gene3D - 6 66 - -
Pumo11g00837 97 SMART sant 13 63 IPR001005 -
Pumo11g00837 97 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Pumo11g00837 97 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pumo11g00837 Pumo-Chr11 30073872 30074377 Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00837 1 93 MYB Transcription Factor Family AT2G31180 65.591 6.18e-41 133
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pumo11g00837 Myb_DNA-binding 5.5e-14 CL0123
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00837 K09422 - gmx:100777621 172.555