Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00818 ATGCAGGGAAAATTAATGGGTGGGCAAGAAATTGCTGTGAAGAGGCTTTCAAGTAGATCTGGACAAGGAATAATTGAGTTCATAACAGAAGTAAAACTGATTGCAAAGCTTCAACACCGAAATCTTGTAAAGCTTCTTGGCTGTTGCATTAAAGGACAGGAAAAATTACTAGTGTATGAATACATGGTTAATGGCAGCCTAGACTCCTTCATATTTGATCAAATAAAAAGTAAATTATTGGATTGGCCTCGACGTTTCCACATAATACTTGGAATTGCTAGGGGGCTTTTGTATCTTCATCAAGATTCTCGATTAAGGATTATTCATAGAGATCTCAAAGCAAGTAATGTTTTACTAGATGAAAAGTTAAATCCAAAAATATCAGATTTTGGAATAGCAAGAGCTTTTGGAGAAGACCAAACTGAAGGAAACACAAATAGAGTAGTTGGGACTTATGGATACATGGCTCCAGAGTATGTTGTTGGTGGGCAATTTTCATTCAAATCTGATGTTTTCAGCTTTGGTATTTTGTTGTTGGAGATTGTATGTGGAAACAAAAATAAATCTCTTTTCCACGAAAACCAAACTCTTAACCTAATTGGTTATGCATGGACACTTTGGAAAGAGCAAAATGCTTTACTGTTGATTGACTCAAGCATAAAGGACTCATGTGTTATCCCAGAAGTACTGCGATGCATCCATGTTAGTCTCTTGTGTACACAACAATACCCGGAGGATAGGCCAACCATGACTTCAGTAATTCAAATGTTAGGGAGTGAGATGGATATGGTTGAGCCAAAAGAGCCTGGTTTCTTTCCAAGGAGGATTTTGAAAGAAGGAAATCTAGGCACAAATCTAAACCAAATGACTTCAAATGATGAATTAACTATTACCTCATTAAGTGCTTGGTACTCAATGAAGTTTATTGTTACTCTGATGAGTTTCATACTTTATATACTGTTTGTCTTTTCTCTTGTATTTTCCATAGCAGCAGACACATCATCCATTTCTCAGTCCCAATCGCTCAGTTTTGGAAAGACCATAGTTTCCCAACGTGGAAACTTTGAACTTGGTTTCTTCAATCTTGGAAATCCAAACAAAAGCTACCTCGGGATTTGGTTCAAGAATATTCCCTCTCAAGACATTGTTTGGGTTGCAAACGGTGGCAACCCAATCAATGATTCATCTGCCATCTTGAAACTAAACAGTTCTGGCAGTTTGGTCCTTTCACACAACAACATGGTTGTTTGGTGCACAAGTTCTCCGAAAGCAGCACTGAATCCGGTGGCAGAGCTCTTGGATTCTGGCAATCTTGTGATAAGAGACCAGAATGCAGCAAATCAAGAGGCATATCTGTGGCAAAGCTTTGATTACCCTTCTGATACAATGCTTTCAGGAATGAAGATTGGATGGGACCTCAAAAGAAACCTCAGTATTCACCTGACAGCTTGGAAGAGTGCTGATGATCCAACCCCAGGAGACTTAACTTGGGGTATTACTCTGCACCCTTATCCCGAGTCCTTTATGATGAAGGGAACAGAAAAGTACCACAGAGTTGGGCCATGGAATGGTTTGCAATTCAGTGGCGGCAGGCCGAAAATTAACAATCCCATTTACCATTACGAGTATGTCTCCAACAAGGAAGAGGTTTATTACACATGGACCCTCAAGACTGCTAGTTTATTATCAAAATTGGTACTTAACCAAACCACAGAAAGACGTCCTCGTTATGTATGGTCAGAGACTGATAAATCATGGAAGCTTTATTCAAACAGGCCAGAAGACGATTGTGACAAATATGGGGTTTGTGGAGCCAATGCATATTGCAGAACTAAATTACCAATGTGTGAGTGCTTAAAAGGGTTCAAGCCTAAGTCTCCTGAAGAATGGAACTCAATGGGCTGGACCCAAGGATGTGTCCTGAAACATCCATTGAGTTGCAAGTATGATGGGTTTGCTCCTATGGATGGCTTGAAAGTGCCAGATACTAAAAGAACATATGTGGATGAGAGTATTGATCTAGAGCAATGCAGAATCAATTGCTTGAAAGATTGTTCCTGTATGGCATATACAAATACAAATATAAGTGGAGCAGGCAGTGGCTGTGTCATGTGGTTTGGTGATTTATTTGACATCAAACTGTTTCCAGTTCAGGAAAGTGGGCAGCGTCTATATATAAGGTTGCCTCCTTCAGAATTAGATTCACCAAAAAAAGAAAAATTCAATCGTGAAGAATCTACCAGGAACAAGAAGAACACTAAAATGATAATTGTAACCTCCGTTGCTGCAACTTTAGGAGGTATACTTGCTATTTATTTCCTCCACCGAAGGAACATTGCCGAGAAGTCAAATGAAGAAAATAAGCATGAAAAGCCTCAGCCCCAACATGGACACAACCGAAGCATTAATATTGATAAGTCAAAGACAAAAAAAAGCATTGAAAGACAACTAGAAGATGTGGATGTGCCTTTGTTTGATCTGCTAACAATCACTATTGCCACTAACAATTTCTTATTGAAAAATAAGATTGGACAAGGTGGCTTTGGACCTGTATATAAGGGAAAATTAGTGGGTGGGCAAGAAATTGCTGTGAAGAGGCTTTCAAGTAGGTCGGGACAAGGAATAACTGAGTTCATAACAGAAGTAAAACTGATTGCAAAGCTTCAACACCGAAATCTTGTAAAGCTCCTCGGCTGTTGCATTAAAGGAAAAGAAAAATTACTAGTATATGAATACATGGTTAATGGCAGCCTAGACTCCTTCATATTTGATCAAATAAAAAGTAAATTATTGGATTGGCCTCGACGCTTCCACATAATACTTGGAATTGCTAGGGGGCTTTTGTATCTTCATCAAGATTCTCGATTAAGGATTATTCATAGAGATCTCAAAGCAAGTAATGTTTTACTGGATGAAAAGTTAAATCCAAAAATATCAGATTTTGGAATGGCAAGAGCTTTTGGAGAAGACCAAACTGAAGGAAACACAAATAGAGTAGTTGGGACTTATGGATACATGGCTCCAGAGTATGCTGTTGATGGGCAATTTTCAATCAAATCTGATGTTTTCAGCTTTGGTATTTTGTTGCTGGAGATTGTATGTGGAAACAAAAATAGAGCTCTTTGTCACGAAAACCAAACTCTTAACCTTGTTGGTTATGCATGGACACTTTGGAAAGAGCAAAATGCTTTACAGTTGATTGACTCAAGCATAAAGGACTCATGTGTTATCCCAGAAGTACTGCGATGCATCCATGTTAGTCTCTTGTGTACGCAACAATACCCGAAGGATAGGCCAACCATGACTTCAGTAATTCAAATGTTAGGGAGTGAGATGGATATGGTTGAGCCAAAAGAGCCTGGTTTCTTTCCAAAGAGGATTATGAAAGAAGGAAAGCTAGGCACAAATCTAAACCAAATGATTTCAAATGATGAATTAACCATTACCTCATTAAGTGGTCGATGA 3465 0.3873 MQGKLMGGQEIAVKRLSSRSGQGIIEFITEVKLIAKLQHRNLVKLLGCCIKGQEKLLVYEYMVNGSLDSFIFDQIKSKLLDWPRRFHIILGIARGLLYLHQDSRLRIIHRDLKASNVLLDEKLNPKISDFGIARAFGEDQTEGNTNRVVGTYGYMAPEYVVGGQFSFKSDVFSFGILLLEIVCGNKNKSLFHENQTLNLIGYAWTLWKEQNALLLIDSSIKDSCVIPEVLRCIHVSLLCTQQYPEDRPTMTSVIQMLGSEMDMVEPKEPGFFPRRILKEGNLGTNLNQMTSNDELTITSLSAWYSMKFIVTLMSFILYILFVFSLVFSIAADTSSISQSQSLSFGKTIVSQRGNFELGFFNLGNPNKSYLGIWFKNIPSQDIVWVANGGNPINDSSAILKLNSSGSLVLSHNNMVVWCTSSPKAALNPVAELLDSGNLVIRDQNAANQEAYLWQSFDYPSDTMLSGMKIGWDLKRNLSIHLTAWKSADDPTPGDLTWGITLHPYPESFMMKGTEKYHRVGPWNGLQFSGGRPKINNPIYHYEYVSNKEEVYYTWTLKTASLLSKLVLNQTTERRPRYVWSETDKSWKLYSNRPEDDCDKYGVCGANAYCRTKLPMCECLKGFKPKSPEEWNSMGWTQGCVLKHPLSCKYDGFAPMDGLKVPDTKRTYVDESIDLEQCRINCLKDCSCMAYTNTNISGAGSGCVMWFGDLFDIKLFPVQESGQRLYIRLPPSELDSPKKEKFNREESTRNKKNTKMIIVTSVAATLGGILAIYFLHRRNIAEKSNEENKHEKPQPQHGHNRSINIDKSKTKKSIERQLEDVDVPLFDLLTITIATNNFLLKNKIGQGGFGPVYKGKLVGGQEIAVKRLSSRSGQGITEFITEVKLIAKLQHRNLVKLLGCCIKGKEKLLVYEYMVNGSLDSFIFDQIKSKLLDWPRRFHIILGIARGLLYLHQDSRLRIIHRDLKASNVLLDEKLNPKISDFGMARAFGEDQTEGNTNRVVGTYGYMAPEYAVDGQFSIKSDVFSFGILLLEIVCGNKNRALCHENQTLNLVGYAWTLWKEQNALQLIDSSIKDSCVIPEVLRCIHVSLLCTQQYPKDRPTMTSVIQMLGSEMDMVEPKEPGFFPKRIMKEGKLGTNLNQMISNDELTITSLSGR 1154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00818 1154 FunFam receptor-like serine/threonine-protein kinase SD1-8 808 912 - -
Pumo11g00818 1154 ProSitePatterns Serine/Threonine protein kinases active-site signature. 958 970 IPR008271 GO:0004672|GO:0006468
Pumo11g00818 1154 Pfam PAN-like domain 647 712 IPR003609 -
Pumo11g00818 1154 SMART ntp_6 647 728 IPR003609 -
Pumo11g00818 1154 Pfam D-mannose binding lectin 382 485 IPR001480 -
Pumo11g00818 1154 ProSiteProfiles Bulb-type lectin domain profile. 333 453 IPR001480 -
Pumo11g00818 1154 SUPERFAMILY Protein kinase-like (PK-like) 3 257 IPR011009 -
Pumo11g00818 1154 Gene3D Phosphorylase Kinase; domain 1 798 912 - -
Pumo11g00818 1154 ProSiteProfiles PAN/Apple domain profile. 647 729 IPR003609 -
Pumo11g00818 1154 MobiDBLite consensus disorder prediction 783 808 - -
Pumo11g00818 1154 Pfam S-locus glycoprotein domain 518 626 IPR000858 GO:0048544
Pumo11g00818 1154 CDD B_lectin 345 459 IPR001480 -
Pumo11g00818 1154 SMART blect_4 339 459 IPR001480 -
Pumo11g00818 1154 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 62 265 - -
Pumo11g00818 1154 ProSiteProfiles Protein kinase domain profile. 1 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g00818 1154 ProSiteProfiles Protein kinase domain profile. 837 1122 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g00818 1154 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 913 1116 - -
Pumo11g00818 1154 SMART serkin_6 837 1115 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g00818 1154 SMART serkin_6 1 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g00818 1154 Gene3D Phosphorylase Kinase; domain 1 1 61 - -
Pumo11g00818 1154 CDD PAN_AP_plant 643 729 - -
Pumo11g00818 1154 CDD STKc_IRAK 843 1108 - -
Pumo11g00818 1154 FunFam Uncharacterized protein 1 61 - -
Pumo11g00818 1154 Pfam Protein tyrosine and serine/threonine kinase 839 1108 IPR001245 GO:0004672|GO:0006468
Pumo11g00818 1154 Pfam Protein tyrosine and serine/threonine kinase 9 257 IPR001245 GO:0004672|GO:0006468
Pumo11g00818 1154 Gene3D Transferase(Phosphotransferase) domain 1 913 1119 - -
Pumo11g00818 1154 Gene3D Transferase(Phosphotransferase) domain 1 62 268 - -
Pumo11g00818 1154 SUPERFAMILY Protein kinase-like (PK-like) 816 1108 IPR011009 -
Pumo11g00818 1154 Gene3D - 328 456 IPR036426 -
Pumo11g00818 1154 SUPERFAMILY alpha-D-mannose-specific plant lectins 382 490 IPR036426 -
Pumo11g00818 1154 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 329 456 - -
Pumo11g00818 1154 ProSitePatterns Serine/Threonine protein kinases active-site signature. 107 119 IPR008271 GO:0004672|GO:0006468
Pumo11g00818 1154 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 417 1132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00818 Pumo-Chr11 29254473 29302485 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00818 2 301 Receptor kinase-like Gene Family AT3G45860 53.896 2.32e-102 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo11g00818 PK_Tyr_Ser-Thr 1.7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00818 - - gmx:100812022 1862.81