Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00813 ATGGCTACTCATACTTTCATCCTCATTGTAGCCTACATAATTGTTGTTCCCTGTGTCAATTTTTCCGAAGCAGCTGATTCTATGCGTTTGTCACAGTCCATCACTGATGGGGATACATTGGTGTCTCAAGGTGGAACATTTGAACTTGGGTTCTTCAGTCCAAGTAAGTCCAAAAACCGTTACCTTGGCATTTGGTACAAGAATATCCCAGTTCAGACAGTGGTTTGGGTTGCAAATAGGGAAAACCCCATCAATGGTTCCTCAGGCATGTTAAAACTGAGCAGCACAGGCAATCTAGTGCTAACCCAAAATGGGTTTCTTGTTTGGCACACAAACTCTCAGAAACAAGCAAAGAATCCAGAGGTGGTGCTCTTGGAAAGTGGCAATCTTGTGGTAAGAAATGAGGGAGATGCAAACACAGAGAAAGAGAACTACTTGTGGCAAAGCTTTGATTTCCCATCTGACACATCACTGCCAAAGATGAAGTTGGGAAGGAACTTCAAACTTGGTTTGGATTGGAGACTAACAACTTGGAAGAGTCCAGATGATCCTTCCCCAGGAATATATTCATTGGGTGTAGAGCTTTATAGTTATCCTGAATATTACCTCATGAAGGGAACTGAAAAGTTCTATAGGATTGGACCATGGAATGGCATACATTTTAGTGGACTACCAAACCAAGCTAACAACTCCATTTATGATTTCGCTTTTGTGAGCAATAAGGATGAGATCTTCTACAGCTATAGCCTCAAGAACGATTCTGTCATCTCGATAATCACGTTAAACGAATCAACACTTATACGTTATGTTTGGGTGACAGGCGATAAAAATTGGAGGGTGTACAAGTCACAACCACTGGACTTTTGTGACACTTATGGTCTCTGTGGACCTTATGGGAATTGCATGATTAATCAGACACAAGTGTGCCAATGTTTGAAAGGGTTTAGTCCAAAGTCACCACAGGCATGGGCTTCATCTGACTGGAGTCAAGGATGTGTCCGCAATAAATCGTTGAGTTGCAATGGTAAAGACAAAGATGGGTTTGTCAAATTTGAAGGCCTGAAAGTTCCAGATACTACACATACTTGGTTGGATGAGAGTATTGCTCTAGAGGAATGCAGAGTGAAGTGCTTGAATAATTGTTCTTGTATGGCCTATACTAATTCAGACATAAGAGGTGCAGGTAGTGGTTGTGTCATGTGGTTTGGTGATCTCGTTGACATGAAGCAGTTTCAAACTGGTGGCCAAGATATATATATCCGAATGTCAGCTTCGGACTTAGAGAGAACACCAGAACAAGTGGAAGATCTGGATCTCCCATTGTTTAATCTACAAGCAATTGCTGTTGCCACAAATGACTTCTCAGAGGACAATAAGCTTGGAGAAGGTGGTTTTGGACCTGTATATTCGGGACAAGAACAAATACTTGTTTATGAATACATGGCCAACAGCAGCCTAGACTACTTCATTTTTGATGACAACAAAGGTAAATTACTAGATTGGCCTCGGAGATTCCACATAATCTGTGGAGTTGCTAGGGGGCTCACGTATCTTCACCAAGACTCTCGATTGAGGATTATCCATAGAGATCTCAAAGCAAGTAACGTTTTACTCGATGACCATTTGAATCCAAAAATATCAGATTTTGGAATGGCCAGAACTTTTGTTGGAGACCAGGCAGAAGGAAACACAAATAGAATAGTTGGAACTTATGGATACATGGCACCTGAATATGCTGTTGATGGGTTGTTTTCAGTCAAATCTGATGTCTTTAGCTTTGGCATTTTATTGTTGGAGGTTATATGTGGCAAGAGAAACAAAGCATATTATTACACAGATACCACTCTTAATCTTGCATGGAGAATGTGGAAAGAGGACAGAGCTTTAGAATTGATTGACTCAAACTTGGGGGACTCATACGTTGTATCAGAAGTATTCCGTTGCATGCATGTTAGTCTCTTGTGTGTGCAGCAGCACCCAGATGATAGGCCTACCATGGACTCTGTTATTCTAATGTTGGGGAGTGAAATGGAACTGGTTGAGCCTAAAGTACCAGGTTTCATTTCGAAAAATATTTCAAGTGAACTTGGTTTGCGTACAAATCACACAGATCAGAGTTTAACCAGCCAAATGACCATTTCCTTATTAGATCCTCGTTGA 2160 0.4106 MATHTFILIVAYIIVVPCVNFSEAADSMRLSQSITDGDTLVSQGGTFELGFFSPSKSKNRYLGIWYKNIPVQTVVWVANRENPINGSSGMLKLSSTGNLVLTQNGFLVWHTNSQKQAKNPEVVLLESGNLVVRNEGDANTEKENYLWQSFDFPSDTSLPKMKLGRNFKLGLDWRLTTWKSPDDPSPGIYSLGVELYSYPEYYLMKGTEKFYRIGPWNGIHFSGLPNQANNSIYDFAFVSNKDEIFYSYSLKNDSVISIITLNESTLIRYVWVTGDKNWRVYKSQPLDFCDTYGLCGPYGNCMINQTQVCQCLKGFSPKSPQAWASSDWSQGCVRNKSLSCNGKDKDGFVKFEGLKVPDTTHTWLDESIALEECRVKCLNNCSCMAYTNSDIRGAGSGCVMWFGDLVDMKQFQTGGQDIYIRMSASDLERTPEQVEDLDLPLFNLQAIAVATNDFSEDNKLGEGGFGPVYSGQEQILVYEYMANSSLDYFIFDDNKGKLLDWPRRFHIICGVARGLTYLHQDSRLRIIHRDLKASNVLLDDHLNPKISDFGMARTFVGDQAEGNTNRIVGTYGYMAPEYAVDGLFSVKSDVFSFGILLLEVICGKRNKAYYYTDTTLNLAWRMWKEDRALELIDSNLGDSYVVSEVFRCMHVSLLCVQQHPDDRPTMDSVILMLGSEMELVEPKVPGFISKNISSELGLRTNHTDQSLTSQMTISLLDPR 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00813 719 Pfam S-locus glycoprotein domain 211 319 IPR000858 GO:0048544
Pumo11g00813 719 Pfam Protein tyrosine and serine/threonine kinase 467 670 IPR001245 GO:0004672|GO:0006468
Pumo11g00813 719 ProSiteProfiles EGF-like domain profile. 285 321 IPR000742 -
Pumo11g00813 719 CDD B_lectin 31 153 IPR001480 -
Pumo11g00813 719 Pfam D-mannose binding lectin 73 179 IPR001480 -
Pumo11g00813 719 SMART serkin_6 454 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g00813 719 Pfam PAN-like domain 340 408 IPR003609 -
Pumo11g00813 719 ProSiteProfiles Protein kinase domain profile. 386 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g00813 719 Gene3D - 20 150 IPR036426 -
Pumo11g00813 719 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 481 681 - -
Pumo11g00813 719 PIRSF SRK 470 719 IPR024171 GO:0004674
Pumo11g00813 719 PIRSF SRK 1 437 IPR024171 GO:0004674
Pumo11g00813 719 PIRSF SRK 428 473 IPR024171 GO:0004674
Pumo11g00813 719 Gene3D Hepatocyte Growth Factor 339 419 - -
Pumo11g00813 719 Gene3D Transferase(Phosphotransferase) domain 1 481 683 - -
Pumo11g00813 719 ProSiteProfiles PAN/Apple domain profile. 340 423 IPR003609 -
Pumo11g00813 719 SUPERFAMILY Protein kinase-like (PK-like) 439 678 IPR011009 -
Pumo11g00813 719 ProSiteProfiles Bulb-type lectin domain profile. 25 145 IPR001480 -
Pumo11g00813 719 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 21 150 - -
Pumo11g00813 719 CDD PAN_AP_plant 338 421 - -
Pumo11g00813 719 ProSitePatterns Serine/Threonine protein kinases active-site signature. 526 538 IPR008271 GO:0004672|GO:0006468
Pumo11g00813 719 Gene3D Phosphorylase Kinase; domain 1 420 475 - -
Pumo11g00813 719 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 14 664 - -
Pumo11g00813 719 SMART ntp_6 343 422 IPR003609 -
Pumo11g00813 719 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 339 422 - -
Pumo11g00813 719 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 184 IPR036426 -
Pumo11g00813 719 SMART blect_4 31 153 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00813 Pumo-Chr11 29065310 29069924 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00813 387 705 Receptor kinase-like Gene Family AT4G23190 40.633 1.72e-89 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo11g00813 PK_Tyr_Ser-Thr 1.3e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00813 - - gmx:100802962 987.638