Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00811 ATGAAAACACGGCTAATCGTCAAGAATCTTTTTGAGAGAACACCAGAACAAGTGGAAGATCTGGATCTCCCATTGTTTAATCTACAAGCAATTGCTGTTGCCACAAATGACTTCTCAGAGGACAATAAGCTTGGAGAAGGTGGTTTTGGACCTGTATATTGGGGGAAATTAGCGGATGGACAACAAGTAGCTGTCAAGAGACTTTCAAGCTTCTCGGGTCAAGGAAGGACTGAGTTCATAAATGAAGTAAAACTAATTGCAAAACTTCAACACCGAAATCTTGTGAAGCTTCTTGGTTGTTGCATTCAGGGACAAGAACAAATACTTGTTTATGAATACATGGCCAACAGCAGCCTAGACTACTTCATTTTTGATGACAACAAAGGTAAATTACTAGATTGGCCTCGGCGATTCCACATAATCTGTGGAGTTGCTAGGGGGCTCACGTATCTTCACCAAGACTCTCGATTGAGGATTATCCATAGAGATCTCAAAGCAAGTAACGTTTTACTCGATGACCATTTGAATCCAAAAATATCAGATTTTGGAATGGCCAGAACTTTTGGTGGAGACCAGACAGAAGGAAACACAAATAGAATAGTTGGAACTTATGGATACATGGCACCTGAATATGCTGTTGATGGGTTGTTTTCAGTCAAATCTGATGTCTTTAGCTTTGGCATTTTATTGTTGGAGGTTATATGTGGCAAGAGAAACAAAGCATATTATTACACAGATACCACTCTTAATCTTGTTGGTCAGCAGCACCCAGATGATAGGCCTACCATGGACTCTGTTATTCTAATGTTGGGGAGTGAAATGGAACTGGTTGAGCCTAAAGAACCAGGTTTCATTTCGAAAAATATTTCAAGTGAACTGGGTTTGCGTACAAATCACACGGATCAGAGTTTAACTAGCCAAATGACCATTTCCTTATTAGATCCACGTTGA 951 0.3996 MKTRLIVKNLFERTPEQVEDLDLPLFNLQAIAVATNDFSEDNKLGEGGFGPVYWGKLADGQQVAVKRLSSFSGQGRTEFINEVKLIAKLQHRNLVKLLGCCIQGQEQILVYEYMANSSLDYFIFDDNKGKLLDWPRRFHIICGVARGLTYLHQDSRLRIIHRDLKASNVLLDDHLNPKISDFGMARTFGGDQTEGNTNRIVGTYGYMAPEYAVDGLFSVKSDVFSFGILLLEVICGKRNKAYYYTDTTLNLVGQQHPDDRPTMDSVILMLGSEMELVEPKEPGFISKNISSELGLRTNHTDQSLTSQMTISLLDPR 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00811 316 SUPERFAMILY Protein kinase-like (PK-like) 18 270 IPR011009 -
Pumo11g00811 316 ProSitePatterns Serine/Threonine protein kinases active-site signature. 159 171 IPR008271 GO:0004672|GO:0006468
Pumo11g00811 316 Gene3D Phosphorylase Kinase; domain 1 5 113 - -
Pumo11g00811 316 SMART serkin_6 38 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g00811 316 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 18 243 - -
Pumo11g00811 316 FunFam Lectin-domain containing receptor kinase A4.3 114 256 - -
Pumo11g00811 316 ProSiteProfiles Protein kinase domain profile. 38 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g00811 316 Gene3D Transferase(Phosphotransferase) domain 1 114 281 - -
Pumo11g00811 316 Pfam Protein tyrosine and serine/threonine kinase 41 256 IPR001245 GO:0004672|GO:0006468
Pumo11g00811 316 FunFam receptor-like serine/threonine-protein kinase SD1-8 11 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00811 Pumo-Chr11 28950582 28952343 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00811 11 302 Receptor kinase-like Gene Family AT4G23190 48.968 1.87e-105 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo11g00811 PK_Tyr_Ser-Thr 9.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00811 - - gmx:100802962 435.261