Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00810 ATGGCTCCAGAGTATGCTGTTGATGGACTATTTTCAATCAAATCTGATGTTTTCAGCTTTGGTATTTTATTGTTGGAGATTATATGTGGGAACAAAAATAGAGCTCTTTGTCATGGAAACCAAACCCTTAACCTTGTTGGTTATGCATGGACACTTTGGAAAGAGCAAAATGCTTTACAGTTGATTGACTCAAGCATAAAGGACTCATGTGTCATCCCAGAAGTACTGCGATGCATCCATGTCAGTCTCTTGTGTGTGCAACAATACCCGGAGGATAGGCCAACCATGGCCTCGGTAATTCAAATGTTAGGTAGTCAGACAGAACTGGTTGAACCAAAAGAACCTGGTTTCTTTCCAAGGAGGATTTCGAATGAAGGAAATTTAAGCACAAATCCAAATCATATGACTTCAAATGATGAATTAACCATTACCTCATTAAATGGACGGTGA 450 0.3933 MAPEYAVDGLFSIKSDVFSFGILLLEIICGNKNRALCHGNQTLNLVGYAWTLWKEQNALQLIDSSIKDSCVIPEVLRCIHVSLLCVQQYPEDRPTMASVIQMLGSQTELVEPKEPGFFPRRISNEGNLSTNPNHMTSNDELTITSLNGR 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00810 149 SUPERFAMILY Protein kinase-like (PK-like) 1 126 IPR011009 -
Pumo11g00810 149 Pfam Protein tyrosine and serine/threonine kinase 1 103 IPR001245 GO:0004672|GO:0006468
Pumo11g00810 149 MobiDBLite consensus disorder prediction 123 149 - -
Pumo11g00810 149 Gene3D Transferase(Phosphotransferase) domain 1 1 115 - -
Pumo11g00810 149 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00810 Pumo-Chr11 28947495 28948743 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00810 1 149 Receptor kinase-like Gene Family AT3G45860 47.134 6.02e-40 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo11g00810 PK_Tyr_Ser-Thr 2.3e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00810 - - gmx:100812007 285.034