Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00809 ATGCAGGCAAAATTAGTAGATGGGCGAGAAATTGCTGTCAAAAGACTTTCAAGAAGTTCTGGACAAGGAATGACCGAGTTCATAACAGAAGTAAAACTGATTGCAAAGCTTCAACACCGAAATCTTGTAAAGCTTCTTGGCTGTTGCATTAAAGAACAAGAAAAAATACTAGTATATGAATATATGGTCAATGGCAGCCTAGACTCCTTCATTTTTGAAAAAACAGATCAAATGAAAGGCAAAATTCTGGATTGGCCTCGACGCTTCCACATAATATTTGGAATAGCTAGGGGGCTTTTGTATCTTCATCAAGATTCGCGATTAAGGATTATTCATAGAGATCTCAAAGCAAGTAACATTTTACTTGATGAAAAGTTAAATCCAAAAATATCAGATTTTGGAATGGCTAGAGCTTTTGGAGCAGACCAAACTGAAGGAAACACAAATAGAGTTGTTGGGACTTAG 465 0.3634 MQAKLVDGREIAVKRLSRSSGQGMTEFITEVKLIAKLQHRNLVKLLGCCIKEQEKILVYEYMVNGSLDSFIFEKTDQMKGKILDWPRRFHIIFGIARGLLYLHQDSRLRIIHRDLKASNILLDEKLNPKISDFGMARAFGADQTEGNTNRVVGT 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00809 154 ProSitePatterns Serine/Threonine protein kinases active-site signature. 110 122 IPR008271 GO:0004672|GO:0006468
Pumo11g00809 154 Gene3D Transferase(Phosphotransferase) domain 1 62 154 - -
Pumo11g00809 154 Pfam Protein tyrosine and serine/threonine kinase 9 144 IPR001245 GO:0004672|GO:0006468
Pumo11g00809 154 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 4 154 - -
Pumo11g00809 154 FunFam Uncharacterized protein 1 61 - -
Pumo11g00809 154 SUPERFAMILY Protein kinase-like (PK-like) 5 154 IPR011009 -
Pumo11g00809 154 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 62 154 - -
Pumo11g00809 154 Gene3D Phosphorylase Kinase; domain 1 1 61 - -
Pumo11g00809 154 SMART serkin_6 1 152 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g00809 154 ProSiteProfiles Protein kinase domain profile. 1 154 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00809 Pumo-Chr11 28946790 28947388 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00809 7 154 Receptor kinase-like Gene Family AT4G23140 66.216 1.76e-63 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo11g00809 PK_Tyr_Ser-Thr 9.9e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00809 - - gmx:100812007 270.396