Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00805 ATGCGTAGGGCAAACCCGATCAATGATTCATCAGGCCACTTAACATTCACCACCACAGGCTATCTTGTGCTCAAAACAAATGAAACCGTTGTTTGGTATCCAACCCATAAAAAAGAAGCTCAGGATCCGGTGGAGGTGGTGGCAGAGCTCTTGGACAATGGCAATCTTGTGGTAAGAGATGAGGAAGATGTAGACCCAGCAGCGTACTTATGGCAAAGTTTTGACTATCCTTCAGATACATTTTTTCCCCGGATGAAGTTGGGATGGGACCTCCGAATCGGTCTAGAACGCAAAATAACGTCTTGGAAGAGTCCAGATGATCCGTCCCCAGGAGATTTTTCTTGGGGTCTATGGCTCCATAGTTATCCGGAGTTTTATCTGATGAAAGGAGCACAAAATTTGCACACCCATGTATGGCTGGAGCAAGAACCAGCAATCTGGGGGCTTTATGAATCTACCCCGCATGACGATTGTGATATGTATGGATTCTGTGGAGCCTACGGGATTTGTACGATTACAGACTCACCAGTATGCCAATGTTTAGAAGGATTCAGTCCAAAGTCACCACAAGAATGGATGGCAATGAACCGGAGCCAGGGATGCATCCGACCTAAACCATTGAGCTGCAAAGACAGCTACACGGATCGGTTTGTCAAATATGCAGGCCTTAAAGTACCAGATACTACACATACATGGCTGGATGAGAATATTGATTTAGAGGAATGCAGAGTCAAATGCTTGAATAATTGCTCTTGCATGGCCTTTACTAATTCAGACATAAGAGGAGGAGGAAGTGGTTGTGTTCTTTGGTTTGGCGACCTAATTGACATCAAACAGTTTAAAACAGGCGGGCAAGATCTATATATCCGAATGCCTGCCTCAGAGTTAGAACAAGGACACAACAAAAGCGTGAAGATAATAATTGCTACCACAGTTGCTGCAATTAGTGGGATACTTTCTTTTTGCATTTCTGTCATATACAGAATCCGAAGGAACATTGCTGGTAAATTATTCAACCATATTGCTACAAAAGATAACATCGAAAGCCAGCTAGGAGATCTGGATCTTCCATTGTTTGATCTACTAACAATCACTACTGCCACTAAGAATTTCTCATTAAATAATAAGATTGGGCAAGGTGGTTTTGGACCTGTATATAAGGGGAAATTAGTGGATGGGCGAGAAGTTGCTGTCAAGCGACTTTCAAGCAGTTCTGGACAAGGAATGACTGAGTTCATAACAGAAGTAAAACTGATTGCAAAGCTTCAACACCGAAATCTTGTAAAACTTCTTGGCTGTTGCATTAGAGGACAAGAAAAATTACTAGTATATGAATACATGCTTAATGGAAGCCTAGACTCCTTCATCTTTGATCATATAAAAAGTAAATTTCTGGATTGGCCACGACGCTTCCACATAATATTTGGAATAGCCAGGGGACTTCTGTATCTTCATCAAGATTACCGATTAAGGATTATTCATAGAGATCTCAAAGCAAGTAACGTTTTACTTGATGAGAAGTTAAATCCAAAAATATCTGATTTTGGAATGGCCAGAGCTTTTGGAGGAGACCAAACTGAAGGAAACACAAATAGAGTTGTTGGCACTTATGGATACATGGCCCCAGAGTATGCAGTTGATGGGCTATTTTCAATAAAATCTGACGTTTTCAGCTTTGGTATTTTGTTGTTGGAGATTATATGTGGGAACAAAAATAGAGCTCTTTGTCATGGAAACCAGACTCTTAACCTTGTTGGTTATGCATGGACACTTTGGAAAGAGCAAAATGCTATACAGTTGATTGACTCAAGCATAAAGGACTCATGTGTCATTCCAGAAGTACTGCGATGCATCCATGTTAGTCTCTTGTGCGTGCAACAATACCCGGAGGATAGGCCGACCATGACCTCGGTAATTCAAATGTTGGGGAGTGAGACAGAACTGGTTGAGCCAAAAGAACCTGGTTTCTTTCCAAGGAGGATTTCAGATGAAGGAAATTTAAGCACAAATCCAAATCACATGTCTTCAAATGATGAATTAACCATTACCTCATTAAATGGCCGTCTCCCAATTTTTCCTTTCATGATTATTGTTGCTTGCATGCTTGTTCCCTCTCTCAAAATTTCTGCAGCTATCCTCAGTGTGTCACAGTCTATCAGTGACGGAAAGACCTTAGTGTCCAACAGAGGAGTGTTTGAGCTTGGTTTCTTCAGCCCGGGTAATTCTAAAAACCGTTACCTGGGGATTTGGTATAAAAATATTCCTACTGATAGAGTTGTCTGGGTCGCGAACGGGGCAATCCCGATCAATGATTCCTCAGGCTACTTAACACTCAGCAGCACAGGCAATCTTGAGCTCAGACAAAACGACACCGTTGTTTGGTATGCAAATTCAATCTATCCAACCCAACCACAGAATACAGTGGCAGAGCTCTTGGACAATGGCAATCTTGTGGTAAGAAACGAGAGATACACAGACCAAGAATCATCCCTGTGGCAAAGCTTTGACTATCCTTCAGATACACTTTTGCCCGGAATGAAGTTGGGATCGGACTTTCGAAGCCATCTGGATCGCAAAATAACATCTTGGAAGAGTCCAGATGATCCATCCCCAGGAGATTTTTATTGGGGTGCTCAATTGCTCAATAACTATCCAGATTTTTATCTGATGAGAGGAACACAAAAGCACTACCGCATCGGACCATGGAATGGACTTCATTTTAGTGGATTGTCGAATCAAAACCCGAATCCATTATATGAATTCCAGTTTTCCAGTGCAAGTATTACCGGGTTTGTCTCCAATAAGGTTAACTCGTTCTACTCGTATACCCTCAAGAACAGTTCTGTCATGGCAAGAGTCAAAATAATCGAAGCCGGTTTCCAAACCCAAGTGTGGGCGGAGGACAAGCAAAAATGGGAGCTTTATGAATCTACCCCGCGTGACCGGTGTGATATGTATGGGTTCTGTGGAGCCAACGGGATTTGTACGATCACAGACTCACCACCGGTATGCAAATGTTTAGAAAAGTTCAGTCCAAAGTCACTACAAGAATGGAATGGAATGGATTGGAGTCAAGGATGCATCCGCAGTAAACCATTAAATTGCAATGACAGCCACATGGATGGGTTTGTCAAATATGCAGGCCTTAAAGTACCAGATACTACACATACTTTGATGGATGAGGATACAGATTTAGAGGAATGCAGAGTCAAATGCTTGAATAATTGTTCTTGCATGGCATTTACTAATTCAGACATAAGAGGAGGAGGTAGTGGTTGTGTCCTTTGGTTTGGCGATCTAATTGACATCAAACAGTTTGAAACTGGCGGGCAAGATCTATATATCCGGATGCCTGCCTCGGAGTTAGAAGAACATGGACACAACAAAAGCGTGAAGATGATAACTGCTACCACAGTTGCAGCAATTAGTGGGGTACTTTCATTCTGCATTTTTGTCATATACAGAGTCCGAAGGAACATTGCTGATAACATCGAAAGCCAGCTAGGAGATCTGGATCTGCCATTGTTTGATCTGCTAACAATCACTACTGCCACTAACAATTTCTCGTCAAATAATAAAATTGGACAAGGTGCTAGGGGGCTTTTGTACCTTCATCAAGATTCCCGATTAAGAATTATTCATAGAGATCTCAAAGCAAGTAATGTTTTACTGGATGAAAAGTTAAATCCAAAAATATCAGATTTTGGAATGGCCAGAGCTTTTGGAGGAGATCAAACTGAAGGAAACACAAATAGAGTTGTTGGGACTTATGGATACATGGCCCCAGAGTATGCTGTTGATGGGCTATTTTCAATCAAATCTGACGTTTTCAGTTTTGGTATTTTATTGTTGGAGATTATAAGTGGGAACAAAAATAGAGCTCTTTGTCATGGAAAGCAGACTCTTAACCTTGTTGGTTATGCATGGACACTTTGGAAAGAGCAAAATGCTTTACAGTTGATTGACTCAAGCATAAAGGATTCATGTGTCATCCCAGAAGTTCTGCGATGCATCCATATTAGTCTCTTGTGCGTGCAACAATACCCTGAGGATAGACCAACCATGACCTCGGAAGCTCAGGATCCGGTGGAGGTGGTGGCAGAGCTCTTGGACAATGGCAATCTTGTGGTAAGAGATGAGGAAGATGTAGACCCAGCAGCGTACTTATGGCAAAGCTTTGACTATCCTTCAGATACATTTTTTCCCCGGATGAAGTTGGGATGGGACCTCCGAATCGGTCTAGAACGCAAAATAACGTCTTGGAAGAGTCCAGATGATCCGTCCCCAGGAGATTTTTCTTGGGGTCTATGGCTCCATAGTTATCCGGAGTTTTATCTGATGAAAGGAGCACAAAAGTACTCCCGCACCGGACCATGGAATGGACTTCATTTTAGTGGTTTATCTCAAAATCAAAGTCAAAATGAAAATCAAAATCCAGTGTATGAATTCAAGTACGTCACTAAGAATGATCTCGTGTACACCTCCAATAAGGTTGAGATGTTCTACTCGAATACTCTCAGGAATAGTTCTGTCATTGCGAGAGTCAAAATAATCAACGCCAGTTTGCACACCCATGTATGGCTGGAGCAAGAACCAGCAATCTGGGCGCTTTATGAATCTACCCCGCATGACGATTGTGATATGTGTGCATTCTGTGGAGCCTACGGGATTTGTACGATTACAGACTCACCAGTATGCCAATGTTTAGAAGGATTCAGTCCAAAGTCACCACAAGAATGGATGGCAACGAACCGGAGCCAGGGATGCGTCCGATGTAAACCATTAAGCTGCAAAGACGGCTACACGGGTCGGTTTGTCAAATATGCAGGCCTTAAAGTACCAGATACTACACATACATGGCTGGATGAGAATATTGATTTAGAGGAATGCAGAGTCGAATGCTTGAATAATTGCTCTTGCATGGCGTTTACTAATTCAGACATAAGAGGAGGAGGTAGTGGTTGTGTTCTTTGGTTTGGTGACCTAATTGACATCAAACAGTTTCAAACAGGCGGGCAAGATCTATATATCCTGATGCCTTCTGTGGAGGCCGATAAGTCAAAGACAAAAGATAACATCAAAAGCCAGATAGGAGATCTGGATCTGCCATTGTTTGATCTACTAACAATCACTACTGCCACCAACAATTTCTCATTAAATAATATGATTGGGCAAGGTGGTTTTGGACCTGTACATAAGAAAGCATCTATTCAAAAGAAAGCAACTATGCAGGGAAAATTAGTGGATGGGCGAGAAGTTGCTGTCAACAGACTTTCAAGCAGTTCTGGACAAGGAATCACTGAGTTCATAACAGAAGTAAAACTGATTGCAAAGCTTCAACACCGAAACCTTGTAAAGCTTCTTGGCTATTGCATTAATAACAATGCTCTGTATTTGCTTCTATGA 5406 0.4193 MRRANPINDSSGHLTFTTTGYLVLKTNETVVWYPTHKKEAQDPVEVVAELLDNGNLVVRDEEDVDPAAYLWQSFDYPSDTFFPRMKLGWDLRIGLERKITSWKSPDDPSPGDFSWGLWLHSYPEFYLMKGAQNLHTHVWLEQEPAIWGLYESTPHDDCDMYGFCGAYGICTITDSPVCQCLEGFSPKSPQEWMAMNRSQGCIRPKPLSCKDSYTDRFVKYAGLKVPDTTHTWLDENIDLEECRVKCLNNCSCMAFTNSDIRGGGSGCVLWFGDLIDIKQFKTGGQDLYIRMPASELEQGHNKSVKIIIATTVAAISGILSFCISVIYRIRRNIAGKLFNHIATKDNIESQLGDLDLPLFDLLTITTATKNFSLNNKIGQGGFGPVYKGKLVDGREVAVKRLSSSSGQGMTEFITEVKLIAKLQHRNLVKLLGCCIRGQEKLLVYEYMLNGSLDSFIFDHIKSKFLDWPRRFHIIFGIARGLLYLHQDYRLRIIHRDLKASNVLLDEKLNPKISDFGMARAFGGDQTEGNTNRVVGTYGYMAPEYAVDGLFSIKSDVFSFGILLLEIICGNKNRALCHGNQTLNLVGYAWTLWKEQNAIQLIDSSIKDSCVIPEVLRCIHVSLLCVQQYPEDRPTMTSVIQMLGSETELVEPKEPGFFPRRISDEGNLSTNPNHMSSNDELTITSLNGRLPIFPFMIIVACMLVPSLKISAAILSVSQSISDGKTLVSNRGVFELGFFSPGNSKNRYLGIWYKNIPTDRVVWVANGAIPINDSSGYLTLSSTGNLELRQNDTVVWYANSIYPTQPQNTVAELLDNGNLVVRNERYTDQESSLWQSFDYPSDTLLPGMKLGSDFRSHLDRKITSWKSPDDPSPGDFYWGAQLLNNYPDFYLMRGTQKHYRIGPWNGLHFSGLSNQNPNPLYEFQFSSASITGFVSNKVNSFYSYTLKNSSVMARVKIIEAGFQTQVWAEDKQKWELYESTPRDRCDMYGFCGANGICTITDSPPVCKCLEKFSPKSLQEWNGMDWSQGCIRSKPLNCNDSHMDGFVKYAGLKVPDTTHTLMDEDTDLEECRVKCLNNCSCMAFTNSDIRGGGSGCVLWFGDLIDIKQFETGGQDLYIRMPASELEEHGHNKSVKMITATTVAAISGVLSFCIFVIYRVRRNIADNIESQLGDLDLPLFDLLTITTATNNFSSNNKIGQGARGLLYLHQDSRLRIIHRDLKASNVLLDEKLNPKISDFGMARAFGGDQTEGNTNRVVGTYGYMAPEYAVDGLFSIKSDVFSFGILLLEIISGNKNRALCHGKQTLNLVGYAWTLWKEQNALQLIDSSIKDSCVIPEVLRCIHISLLCVQQYPEDRPTMTSEAQDPVEVVAELLDNGNLVVRDEEDVDPAAYLWQSFDYPSDTFFPRMKLGWDLRIGLERKITSWKSPDDPSPGDFSWGLWLHSYPEFYLMKGAQKYSRTGPWNGLHFSGLSQNQSQNENQNPVYEFKYVTKNDLVYTSNKVEMFYSNTLRNSSVIARVKIINASLHTHVWLEQEPAIWALYESTPHDDCDMCAFCGAYGICTITDSPVCQCLEGFSPKSPQEWMATNRSQGCVRCKPLSCKDGYTGRFVKYAGLKVPDTTHTWLDENIDLEECRVECLNNCSCMAFTNSDIRGGGSGCVLWFGDLIDIKQFQTGGQDLYILMPSVEADKSKTKDNIKSQIGDLDLPLFDLLTITTATNNFSLNNMIGQGGFGPVHKKASIQKKATMQGKLVDGREVAVNRLSSSSGQGITEFITEVKLIAKLQHRNLVKLLGYCINNNALYLLL 1801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00805 1801 SMART ntp_6 1038 1117 IPR003609 -
Pumo11g00805 1801 SMART ntp_6 212 291 IPR003609 -
Pumo11g00805 1801 SMART ntp_6 1600 1679 IPR003609 -
Pumo11g00805 1801 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 208 291 - -
Pumo11g00805 1801 SMART serkin_6 371 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g00805 1801 CDD PAN_AP_plant 1594 1680 - -
Pumo11g00805 1801 SMART egf_5 1545 1593 IPR000742 -
Pumo11g00805 1801 SMART egf_5 982 1028 IPR000742 -
Pumo11g00805 1801 SMART egf_5 157 202 IPR000742 -
Pumo11g00805 1801 Pfam Protein tyrosine and serine/threonine kinase 372 642 IPR001245 GO:0004672|GO:0006468
Pumo11g00805 1801 Pfam Protein tyrosine and serine/threonine kinase 1718 1800 IPR001245 GO:0004672|GO:0006468
Pumo11g00805 1801 ProSiteProfiles PAN/Apple domain profile. 209 292 IPR003609 -
Pumo11g00805 1801 CDD STKc_IRAK 377 642 - -
Pumo11g00805 1801 Gene3D Transferase(Phosphotransferase) domain 1 1190 1371 - -
Pumo11g00805 1801 Gene3D Transferase(Phosphotransferase) domain 1 447 652 - -
Pumo11g00805 1801 ProSiteProfiles PAN/Apple domain profile. 1597 1681 IPR003609 -
Pumo11g00805 1801 ProSiteProfiles Protein kinase domain profile. 1081 1364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g00805 1801 SUPERFAMILY alpha-D-mannose-specific plant lectins 759 869 IPR036426 -
Pumo11g00805 1801 ProSiteProfiles Protein kinase domain profile. 371 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g00805 1801 FunFam receptor-like serine/threonine-protein kinase SD1-8 343 446 - -
Pumo11g00805 1801 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 447 650 - -
Pumo11g00805 1801 ProSitePatterns Serine/Threonine protein kinases active-site signature. 492 504 IPR008271 GO:0004672|GO:0006468
Pumo11g00805 1801 Pfam D-mannose binding lectin 1356 1422 IPR001480 -
Pumo11g00805 1801 Pfam D-mannose binding lectin 3 103 IPR001480 -
Pumo11g00805 1801 Pfam D-mannose binding lectin 759 864 IPR001480 -
Pumo11g00805 1801 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1212 1224 IPR008271 GO:0004672|GO:0006468
Pumo11g00805 1801 Pfam S-locus glycoprotein domain 897 1014 IPR000858 GO:0048544
Pumo11g00805 1801 Pfam S-locus glycoprotein domain 1455 1576 IPR000858 GO:0048544
Pumo11g00805 1801 Pfam S-locus glycoprotein domain 124 188 IPR000858 GO:0048544
Pumo11g00805 1801 SUPERFAMILY Protein kinase-like (PK-like) 1196 1357 IPR011009 -
Pumo11g00805 1801 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 3 633 - -
Pumo11g00805 1801 SUPERFAMILY alpha-D-mannose-specific plant lectins 2 108 IPR036426 -
Pumo11g00805 1801 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1169 1361 - -
Pumo11g00805 1801 Gene3D - 706 835 IPR036426 -
Pumo11g00805 1801 Gene3D - 2 74 IPR036426 -
Pumo11g00805 1801 FunFam Os04g0303100 protein 749 894 - -
Pumo11g00805 1801 ProSiteProfiles PAN/Apple domain profile. 1035 1118 IPR003609 -
Pumo11g00805 1801 Gene3D Phosphorylase Kinase; domain 1 332 446 - -
Pumo11g00805 1801 Gene3D Phosphorylase Kinase; domain 1 1679 1801 - -
Pumo11g00805 1801 SUPERFAMILY alpha-D-mannose-specific plant lectins 1364 1427 IPR036426 -
Pumo11g00805 1801 CDD B_lectin 716 838 IPR001480 -
Pumo11g00805 1801 SUPERFAMILY Protein kinase-like (PK-like) 1694 1800 IPR011009 -
Pumo11g00805 1801 CDD PAN_AP_plant 206 292 - -
Pumo11g00805 1801 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 1685 1801 - -
Pumo11g00805 1801 ProSiteProfiles Protein kinase domain profile. 1717 1801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g00805 1801 SUPERFAMILY Protein kinase-like (PK-like) 353 642 IPR011009 -
Pumo11g00805 1801 Pfam PAN-like domain 1602 1665 IPR003609 -
Pumo11g00805 1801 Pfam PAN-like domain 209 277 IPR003609 -
Pumo11g00805 1801 Pfam PAN-like domain 1035 1103 IPR003609 -
Pumo11g00805 1801 SMART blect_4 716 838 IPR001480 -
Pumo11g00805 1801 ProSiteProfiles Bulb-type lectin domain profile. 1 71 IPR001480 -
Pumo11g00805 1801 Pfam Protein kinase domain 1175 1360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g00805 1801 ProSiteProfiles Bulb-type lectin domain profile. 710 832 IPR001480 -
Pumo11g00805 1801 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 706 835 - -
Pumo11g00805 1801 CDD PAN_AP_plant 1032 1118 - -
Pumo11g00805 1801 ProSiteProfiles EGF-like domain profile. 154 190 IPR000742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00805 Pumo-Chr11 28772364 28836508 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00805 303 659 Receptor kinase-like Gene Family AT4G23190 51.791 3.09e-115 376
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo11g00805 PK_Tyr_Ser-Thr 2.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00805 - - aip:110265385 1407.51