Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00804 ATGTATGGGTTCTGTGGAGCCTACGGGATTTGTATGATCACGGACTCACCGGTATGCAAATGTTTAGAAAAGTTCAGTCCAAAGTCACTACAAGAATGGAATGGAATGGATTGGAGTCAAGGATCCGTCCGCAATAAACCATTAAGCTGCAATGACAGCCACATGGATGGGTTTGTCAAATATGTAGGCCTTAAAGTACCAGATACTACACATACTTTGATGGATGAGGATACATATTTAGAGGAATGCAGAGTCATATGCTTGAATAATTGTTCTTGCATGGCATTTACTAATTCAGACATAAGAGGAGGAGGTAGTGGTTGTGTCCTTTGGTTTGGCGATCTAATTGACATCAAACAGTTTGAAACTGGCGGGCAAGATCCATATATCCGGATGCCTGCCTCGGAGTTAGATAAGTCAAACACAAAAGATAACATCGAAAGCCAGCTAGGAGATCTGGATCTGCCATTGTTTGATCTGCTAACAATCACTACTGCCACTAACAATTTCTCGTCAAATAATAAAATTGGACAAGGTGGTTTTGGACCTGTATACAAGGGAAAATTAGTGGATGGGCGAAAAGTTGCTGTCAAGAGACTTTCAAGCAGTTCTGGGCAAGGAATAACTGAGTTCATGACAGAAGTGAAGCTGATTGCAAAGCTTCAGCACCGAAATCTTGTAAAGCTTCTTGGCTGTTGCATTAGAGGAAAAGAAAGATTACTAGTATATGAATACATGGTTAATGGCAGCCTAGACTCCTTCATTTTTGAGCAAACAAAAGGAAAATTTCTGGATTTGCCTCGACGCTTCCATGTAATATTTGGAATAGCTAGGGGGGTTTTGTACCTTCATCAAGATTCCCGATTAAGAATTATTCATAGAGATCTCAAAGCAAGTAATGTTTTACTGGATGAAAAGTTAAATCCAAAATTATCAGATTTTGGAATGGCCAGAGCTTTTGGAGGAGATCAAACTGAAGGAAACACAAATAGAGTTGTTGGGACTTGTGGATACATGGCCCCAGAGTATGCTGTTGTTGGGCTATTTTCAATAAAATCTTATGTTTTCAGTTTTTGTATTTTATTGTTGGAGATTATAAGTGGGAACAAAAATAGAGCTCTTTGTCACGGAAAGCAGACTCTTAACCTTGTTGGTTATTTGATTGACTCAAGCATAACGGATTCATGTGTCATACCAGAAGTTCTGCGATGCATCCATGTTAGTCTCTTGTGCGTGCAACAATACCCTGAGGATAGGCCAACCATGACCTCGGTAATTCAAATGTTGGGGAGTGAGATGGAACTGGTTGAGCCAAAAGAACCTGGTTTCTTTCCAAGGAAGATTTCAGATGAAGGAAATTTATGCAAAAATCTAAACCAAATGACTTCAAATAATGAATTAACCATTACCTCATTAAATGGCCGGTGA 1428 0.3943 MYGFCGAYGICMITDSPVCKCLEKFSPKSLQEWNGMDWSQGSVRNKPLSCNDSHMDGFVKYVGLKVPDTTHTLMDEDTYLEECRVICLNNCSCMAFTNSDIRGGGSGCVLWFGDLIDIKQFETGGQDPYIRMPASELDKSNTKDNIESQLGDLDLPLFDLLTITTATNNFSSNNKIGQGGFGPVYKGKLVDGRKVAVKRLSSSSGQGITEFMTEVKLIAKLQHRNLVKLLGCCIRGKERLLVYEYMVNGSLDSFIFEQTKGKFLDLPRRFHVIFGIARGVLYLHQDSRLRIIHRDLKASNVLLDEKLNPKLSDFGMARAFGGDQTEGNTNRVVGTCGYMAPEYAVVGLFSIKSYVFSFCILLLEIISGNKNRALCHGKQTLNLVGYLIDSSITDSCVIPEVLRCIHVSLLCVQQYPEDRPTMTSVIQMLGSEMELVEPKEPGFFPRKISDEGNLCKNLNQMTSNNELTITSLNGR 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00804 475 ProSiteProfiles Protein kinase domain profile. 170 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g00804 475 CDD PAN_AP_plant 47 133 - -
Pumo11g00804 475 SMART ntp_6 53 132 IPR003609 -
Pumo11g00804 475 ProSiteProfiles PAN/Apple domain profile. 50 134 IPR003609 -
Pumo11g00804 475 SMART serkin_6 170 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g00804 475 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 15 456 - -
Pumo11g00804 475 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 246 437 - -
Pumo11g00804 475 SUPERFAMILY Protein kinase-like (PK-like) 155 438 IPR011009 -
Pumo11g00804 475 Gene3D Phosphorylase Kinase; domain 1 132 245 - -
Pumo11g00804 475 Pfam Protein tyrosine and serine/threonine kinase 173 429 IPR001245 GO:0004672|GO:0006468
Pumo11g00804 475 Gene3D Transferase(Phosphotransferase) domain 1 246 439 - -
Pumo11g00804 475 ProSitePatterns Serine/Threonine protein kinases active-site signature. 291 303 IPR008271 GO:0004672|GO:0006468
Pumo11g00804 475 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 134 245 - -
Pumo11g00804 475 CDD STKc_IRAK 176 429 - -
Pumo11g00804 475 Pfam PAN-like domain 50 118 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00804 Pumo-Chr11 28764705 28767347 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00804 141 443 Receptor kinase-like Gene Family AT4G23230 56.426 1.75e-111 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo11g00804 PK_Tyr_Ser-Thr 1.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00804 - - gmx:100812007 737.258