Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00802 ATGAACATTCTTTCTTTCATGATTATGGTTGCTTGCATACTTATTCCCTCTCTCAGAATTTCCATAGCAAACGACTCTATTAACATGCCACAGTCCATTAGTGATGGGAAGAGCTTGGTGTCAAAAGGTGGAAAGTTTGAACTTGGGTTTTTCAGCCCAGGTAGTTCCCAGAAACGTTATCTGGGTATTTGGTACAAAAATATCCCAATTCAGACAGTTGTTTGGGTTGCTAATGGGGCCAACCCCATCAATGATTCCTCAGGCATATTAACACTCAACAGCACAGGCAATCTTCTTCTCACCCAAAATGGGTCTCTTGTTTGGTACACCAACAACTCTCACAAACAAGCACAGAATCCGGTAGCAGTGCTCTTGGACAGTGGCAATCTTGTGATAAGAAATGAGGGAGAAACAAACCCAGAAGCGTATTTGTGGCAAAGCTTTGACTATCCATCTGATACACTCTTGCCAGGGATGAAGTTGGGATGGGACCTTCGAACCGGTCTGGACCGGAGACTAACAGCTTGGAAAAGTCCAGATGATCCATCCCCAGGAGACGTTTACCGGGATCTAGAACTCTATAGCTACCCTGAGTTCTATATAATGAAGGGAACAAAAAAGGTATACCGGTTTGGACCTTGGAATGGCCTATATTTTAGTGGAGTTCCAGATCTTCGGAATAACACCATTTTTGGCTTCAACTTTGTCAGCAATAAGGATGAGAGTTACTGCATATTTAGCCCCACAAATGATTTTGTCATGTCCAGAATTGTAATGAACGAATCAAGTACAATTTATCGCTATGAATGGGTGGAGGATGATCAAAATTGGAGGATATACACGTCACTTCCGAAAGACTTTTGTGACTCTTATGGTCTCTGTGGAGTCTATGGGAATTGCATGACCACACAGACACAAGTGTGCCAATGTTTGGAAGGGTTTAGTCCCAAGTCACCACGAGCATGGGTTTCATCTGGGTGGAGTCAAGGATGTGTCCGCAATAAACCATTGAGCTGCAAAGACAAACTCACAGATGGATTTGTCAAATACGTAGGGCTGAAAGTTCCAGATACTACACATACTTGGTTGGATGAGAGTATTGGTCTAGAGGAATGCAGAGTGAAGTGCTTGAATAATTGTTCTTGTATAGCCTATACTAATTCAGACATAAGAGGTGAAGGTAGTGGTTGTGTCATGTGGTTTGGAGATCTCATTGACATGAAACAGTTTCAAACTGGTGGGCAAGATCTATATATCAGGATGCCTGCTTCAGAGTTAGAATCTGTATATAGGCACAAGAAGAACATGGCAACGATAGCTGCTTCTACCACTGCTGCAATTTGTGGGGTTCTTTTACTAAGTAGTTATTTTATTTGCAGAATCCGGAGGAACAATGCTGAGAATTCATCGATAGAAGAATACAATGAAAATCATGTAGATGATCTGGACGTCCAATTGTTTGATCTATTGACAATTGCAACTGCCACTAACGACTTCTCCATAGAAAATAAGATTGGAGAAGGTGGTTTTGGACCTGTATACAAGGGAATATTAATGGATGGGCAGGAAATTGCTGTAAAGACTCTATCAAGGAGCTCATGGCAAGGAGTGACAGAGTTCATAAATGAAGTAAAATTAATTGCAAAACTTCAGCATCGGAATCTTGTAAAACTTCTTGGTTGTTGCATTCAAGGACAGGAAAAAATGCTAATTTATGAGTACATGGCAAACGGCAGCCTAGACTCCTTCATTTTTGATGATAAAAAAAGTAAATTGCTAGAGTGGCCCCAACGCTTCCACATAATCTGTGGAATTGCAAGGGGGCTAATGTATCTTCATCAAGATTCCCGATTGAGGATTATCCATAGAGATCTCAAAGCAGGTAACGTTCTGCTTGATGAAAGTTTGAGCCCAAAAATATCAGATTTTGGATTGGCTAGAATTTTTGGAGGAGACCAGATTGAAGGAAACACGAGTAGAGTAGTTGGGACCTATGGGTATATGGCACCGGAGTATGCTACTGATGGGTTATTTTCTGTGAAATCTGATGTCTTTAGCTTTGGCATCTTAGCGTTGGAAATTGTATGTGGGAAGAGAAACAGAGGACTTTATCACACAGATAAGAATCTTAACCTCGTTGGTCATGCATGGACATTATGGAAAGCGGGTAGGGCACTAGAGTTGATCGATCACAACATGAAGCAGTCATGCGTTACATCAGAAGTATTGCGTTGCCTCCATCAGTACCCTGAAGATAGGCCTACAATGGCGTCCGTGATTCTAATGTTGGAGAGTCAGATGGAATTGGTTGAGCCTAAAGAACATGGTTTCATTTCGAGAAATGTTTTAGGTGAAGGAGATTTACACTCGAATTTGAAAGACCTCAATCCATATAATCAATATCCAAATAACGGAGCACCACAAGAGTTGACAATGGGCATTCTTCCTTTCATGATTATGGTTGCTTGCATACTTGTTCCCACTGTCAAAATTTCTGTAGCAAATGATTCTATCAACGTGCCCCAGTCTATGAGTGATGGAGAGACCATGGTGTCAAAAGGTGGAAAGTTTGAACTTGGATTTTTTAGCCCAGGTAGTTCCCAGAAACGTTATTTGGGCATTTGGTACAAGAATGTCCCAAGTTCAGACAGTTGTTTGGGTTAG 2664 0.4133 MNILSFMIMVACILIPSLRISIANDSINMPQSISDGKSLVSKGGKFELGFFSPGSSQKRYLGIWYKNIPIQTVVWVANGANPINDSSGILTLNSTGNLLLTQNGSLVWYTNNSHKQAQNPVAVLLDSGNLVIRNEGETNPEAYLWQSFDYPSDTLLPGMKLGWDLRTGLDRRLTAWKSPDDPSPGDVYRDLELYSYPEFYIMKGTKKVYRFGPWNGLYFSGVPDLRNNTIFGFNFVSNKDESYCIFSPTNDFVMSRIVMNESSTIYRYEWVEDDQNWRIYTSLPKDFCDSYGLCGVYGNCMTTQTQVCQCLEGFSPKSPRAWVSSGWSQGCVRNKPLSCKDKLTDGFVKYVGLKVPDTTHTWLDESIGLEECRVKCLNNCSCIAYTNSDIRGEGSGCVMWFGDLIDMKQFQTGGQDLYIRMPASELESVYRHKKNMATIAASTTAAICGVLLLSSYFICRIRRNNAENSSIEEYNENHVDDLDVQLFDLLTIATATNDFSIENKIGEGGFGPVYKGILMDGQEIAVKTLSRSSWQGVTEFINEVKLIAKLQHRNLVKLLGCCIQGQEKMLIYEYMANGSLDSFIFDDKKSKLLEWPQRFHIICGIARGLMYLHQDSRLRIIHRDLKAGNVLLDESLSPKISDFGLARIFGGDQIEGNTSRVVGTYGYMAPEYATDGLFSVKSDVFSFGILALEIVCGKRNRGLYHTDKNLNLVGHAWTLWKAGRALELIDHNMKQSCVTSEVLRCLHQYPEDRPTMASVILMLESQMELVEPKEHGFISRNVLGEGDLHSNLKDLNPYNQYPNNGAPQELTMGILPFMIMVACILVPTVKISVANDSINVPQSMSDGETMVSKGGKFELGFFSPGSSQKRYLGIWYKNVPSSDSCLG 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00802 887 Pfam PAN-like domain 341 407 IPR003609 -
Pumo11g00802 887 ProSiteProfiles Bulb-type lectin domain profile. 24 145 IPR001480 -
Pumo11g00802 887 CDD PAN_AP_plant 336 422 - -
Pumo11g00802 887 SMART ntp_6 342 421 IPR003609 -
Pumo11g00802 887 CDD B_lectin 31 151 IPR001480 -
Pumo11g00802 887 ProSiteProfiles Protein kinase domain profile. 499 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g00802 887 Pfam S-locus glycoprotein domain 209 318 IPR000858 GO:0048544
Pumo11g00802 887 Gene3D Phosphorylase Kinase; domain 1 473 574 - -
Pumo11g00802 887 SMART serkin_6 499 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g00802 887 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 463 574 - -
Pumo11g00802 887 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 148 - -
Pumo11g00802 887 Gene3D Transferase(Phosphotransferase) domain 1 575 777 - -
Pumo11g00802 887 Pfam Protein tyrosine and serine/threonine kinase 500 760 IPR001245 GO:0004672|GO:0006468
Pumo11g00802 887 SMART blect_4 30 151 IPR001480 -
Pumo11g00802 887 CDD STKc_IRAK 505 764 - -
Pumo11g00802 887 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 338 421 - -
Pumo11g00802 887 Pfam D-mannose binding lectin 72 177 IPR001480 -
Pumo11g00802 887 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Pumo11g00802 887 Gene3D - 19 148 IPR036426 -
Pumo11g00802 887 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 182 IPR036426 -
Pumo11g00802 887 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 575 771 - -
Pumo11g00802 887 ProSiteProfiles PAN/Apple domain profile. 339 422 IPR003609 -
Pumo11g00802 887 SUPERFAMILY Protein kinase-like (PK-like) 479 764 IPR011009 -
Pumo11g00802 887 PIRSF SRK 807 885 IPR024171 GO:0004674
Pumo11g00802 887 PIRSF SRK 1 796 IPR024171 GO:0004674
Pumo11g00802 887 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 12 747 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00802 Pumo-Chr11 28396619 28637682 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00802 435 777 Receptor kinase-like Gene Family AT4G23230 51.567 2.64e-114 361
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo11g00802 PK_Tyr_Ser-Thr 1.3e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00802 - - gmx:100802962 1440.25