Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00792 ATGGCCTCTTTCAGTTTTCTGTTTCTTTTTGCCAAACTCCTCATATTGTTCCCTTCAATTTCATCTGCAACTGATGCCATTAGATCGTCGCAGTCCCTTCCTGATGGCAAAACCTTGGTGTCTAAAGATGGAACTTTCGAAATGGGTTTCTTCAGTCCAAGCAATAATAACAGCACCACAAACCGCTATGTTGGAATATGGTACAAAAGTATCCCAGTTAGAACCGTTGTTTGGGTTGCCAACCGTGAAAACCCAGTTAAAGACAACTCCAGCAAGTTGAGCATAAGCACACAAGGAAAACTTGTGATCCTCAGCAAGAACAATACTCTTGTTTGGTCTGCAAACTCAACTGAAGAAACAAAAGCACAGAGTCTAATTGTTCAGCTTTTGGAGTCAGGGAACTTGGTACTAAGAGATGAGAAAGATTCAAATCCACAAAACTACTTGTGGCAGAGCTTTGACTACCCTTGTGATACTTTTCTGCCAGGAATGAAGATTGGATGGAACCTTAAGACAGGTCATAGCTGGCGATTAACGGCGTGGAAGAACTGGGATGACCCTTCTCCTGGGGACTTCACTTGGGGTATGGTGCTTAGTAACCCTCGTGAATTGGTTATGTGGAAAGGTTCTAGTGAGTATTATAGGAGTGGCCCTTGGGATGGTGTTAGATTCAGTGGCAAAACCACTCCCCGTTATAACTTACAATTTAGGTCGACTCCTGATGAAGTGTATTACACATACAACTTCACGAGTGATTCATTGATTACAAGAGTTGTTTTGAACCAATCTGATTATTATCGCCATCGCTATAATTGGATTGAAGAGAACCAAACTTGGAGTCGTTATTCATCGGTGCCCAGTGACATTTGTGACAAGTACAATCATTGTGGTCCCTATGGGAATTGTATTGTGAGTGAGTCACCACGCTGCCAGTGTTTAAAGGGGTTCAAGCGAAAATCAGTTCAAAATTATGATTCATTGGATTGGAGTCAAGGATGTGTGCTTAGTGAACCATCGAGCTGTGGAGTCAGAAACAAAGATGGTTTTGAAAAAATTAGTGGGTTGAAATTGCCAGATACTACAAGGTCTTGGGTTGATGGAAATTTGACACTTGAGAATTGCAAGGCCAAATGCTTGAAAAACTGTTCTTGCACTGCATATGCAAGTTTAGATATCAGAGATGGTAAAGGTTGTATCATTTGGTTTGGAGCTTTGGTTGATTTAAGGGCGGCTTCAATTCCCGGGCAAGATCTATACATCCGAATGGTTGCTTCAGAAACTGAAGAAAAGGGAGGGCATAAGAAAATGGTAGCAGTGGTGATTCCAGTTATTCTCCTGGCTTTTGTGATTGTTTGCATTTTCACGTATATTTACTGGAGGAAAAGAAAGCTTAGAGAAAACACCACAGTAGAAAATAAAGATGAAAGCTGTGAAGAAGACTTAGAGCTTCCTTTCTTTGATTTTTCTACAATAGTTCGTGCCACTAGTGACTTCTCAAGTGACAAGAGGCTTGGCGAAGGTGGTTTTGGGCCAGTGTACAGGGGTACACTAGTAGATGGACAAGAGATTGCTGCCAAGAGGCTTTCTAATAATACTGGACAAGGAATGAAAGAATTCAAGAATGAAGTTATATTGTGTGCCAAACTTCAGCACCGGAATCTTGTTAAGGTTCTCGGTTGTTCCATCCAAGGAGAGGAAAAAGTGCTCATCTATGAATACATGCCTAATAAAAGCCTAGATTCTTTTCTCTTTGATTCTTCCAAAAGTGGACTCCTAGACTGGTCTAAGCGCTTTAACATTATATTTGGAATTGCTCGGGGACTTCTTTATCTTCATCAAGATTCTAGATTAAGAATCATTCATAGAGACATGAAAGCAAGCAATATTCTACTAGATAGCGAGTTGAATCCAAAAATTTCAGATTTTGGTGTGGCACGAATGTTTAGTGGAAATCAAACAGAAGGGAATACAAAAATGGTGGTTGGAACATATGGCTACATGGCACCAGAATATGCAATTGATGGGCTATTCTCTGTCAAATCCGATGTATATAGCTTTGGAATACTATTACTTGAGATAGTAAGCGGGAAGAAAAACAGAGGATTTTTCTATCCAGATCATGGATTCAATCTATTAGGACATGCGTGGAGATTGTGGAAGGAGAACACTCCAATGGAATTAGTTGATGCTTCTTTAGATGACACCTTTACCGCATCAGAAGTACTACGCTGCATTCATGTTGGTCTTTTATGTGTGCAACTACATCCAGAGGATAGGCCAAACATGGCATCAGTGATTTTTATGTTGAGCAGTGAAAATACTTTGCCACAACCTAAGGAACCCGGATTCCTTATTGAAAGGATGAAGATTGCTGGAGAATCTTCAACTAGCAATCAAATTAGGACCTCCACTAATGAATTAACTTTGACACTGCTAGAGGCTAGATAG 2448 0.404 MASFSFLFLFAKLLILFPSISSATDAIRSSQSLPDGKTLVSKDGTFEMGFFSPSNNNSTTNRYVGIWYKSIPVRTVVWVANRENPVKDNSSKLSISTQGKLVILSKNNTLVWSANSTEETKAQSLIVQLLESGNLVLRDEKDSNPQNYLWQSFDYPCDTFLPGMKIGWNLKTGHSWRLTAWKNWDDPSPGDFTWGMVLSNPRELVMWKGSSEYYRSGPWDGVRFSGKTTPRYNLQFRSTPDEVYYTYNFTSDSLITRVVLNQSDYYRHRYNWIEENQTWSRYSSVPSDICDKYNHCGPYGNCIVSESPRCQCLKGFKRKSVQNYDSLDWSQGCVLSEPSSCGVRNKDGFEKISGLKLPDTTRSWVDGNLTLENCKAKCLKNCSCTAYASLDIRDGKGCIIWFGALVDLRAASIPGQDLYIRMVASETEEKGGHKKMVAVVIPVILLAFVIVCIFTYIYWRKRKLRENTTVENKDESCEEDLELPFFDFSTIVRATSDFSSDKRLGEGGFGPVYRGTLVDGQEIAAKRLSNNTGQGMKEFKNEVILCAKLQHRNLVKVLGCSIQGEEKVLIYEYMPNKSLDSFLFDSSKSGLLDWSKRFNIIFGIARGLLYLHQDSRLRIIHRDMKASNILLDSELNPKISDFGVARMFSGNQTEGNTKMVVGTYGYMAPEYAIDGLFSVKSDVYSFGILLLEIVSGKKNRGFFYPDHGFNLLGHAWRLWKENTPMELVDASLDDTFTASEVLRCIHVGLLCVQLHPEDRPNMASVIFMLSSENTLPQPKEPGFLIERMKIAGESSTSNQIRTSTNELTLTLLEAR 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00792 815 ProSiteProfiles PAN/Apple domain profile. 341 423 IPR003609 -
Pumo11g00792 815 PIRSF SRK 1 815 IPR024171 GO:0004674
Pumo11g00792 815 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 574 777 - -
Pumo11g00792 815 ProSiteProfiles EGF-like domain profile. 286 322 IPR000742 -
Pumo11g00792 815 Pfam D-mannose binding lectin 75 182 IPR001480 -
Pumo11g00792 815 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 187 IPR036426 -
Pumo11g00792 815 SMART serkin_6 498 745 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g00792 815 SMART ntp_6 344 422 IPR003609 -
Pumo11g00792 815 Gene3D Phosphorylase Kinase; domain 1 459 573 - -
Pumo11g00792 815 Pfam PAN-like domain 341 408 IPR003609 -
Pumo11g00792 815 Pfam Protein tyrosine and serine/threonine kinase 501 766 IPR001245 GO:0004672|GO:0006468
Pumo11g00792 815 Pfam S-locus glycoprotein domain 214 319 IPR000858 GO:0048544
Pumo11g00792 815 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 9 760 - -
Pumo11g00792 815 Gene3D Hepatocyte Growth Factor 340 418 - -
Pumo11g00792 815 SUPERFAMILY Protein kinase-like (PK-like) 482 778 IPR011009 -
Pumo11g00792 815 CDD B_lectin 30 156 IPR001480 -
Pumo11g00792 815 ProSitePatterns Serine/Threonine protein kinases active-site signature. 619 631 IPR008271 GO:0004672|GO:0006468
Pumo11g00792 815 CDD PAN_AP_plant 338 421 - -
Pumo11g00792 815 ProSiteProfiles Bulb-type lectin domain profile. 24 150 IPR001480 -
Pumo11g00792 815 CDD STKc_IRAK 504 769 - -
Pumo11g00792 815 Gene3D - 19 153 IPR036426 -
Pumo11g00792 815 Gene3D Transferase(Phosphotransferase) domain 1 574 780 - -
Pumo11g00792 815 SMART blect_4 30 156 IPR001480 -
Pumo11g00792 815 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 153 - -
Pumo11g00792 815 ProSiteProfiles Protein kinase domain profile. 498 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g00792 815 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 461 573 - -
Pumo11g00792 815 Pfam Domain of unknown function (DUF3403) 770 815 IPR021820 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00792 Pumo-Chr11 27576765 27588223 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00792 436 799 Receptor kinase-like Gene Family AT4G23190 51.081 5.49e-131 401
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo11g00792 PK_Tyr_Ser-Thr 3.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00792 - - cave:132173746 1003.05