Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00791 ATGACGATTTTCACTCTCACACTTGTTATTGCCAACCTACTTTTTCTCCTCTCAAAAGCTTCCTCAACTGACACACTTACCCTCTCACAATCTCTTCCTGATGGCACCACCTTAGTGTCCAAAGATGAAACTTTTGAACTGGGTTTCTTTTCCCTAAGAAACTCCACAAACCGTTACCTAGGAATCTGGTTCAAAAACATACCAATAAAAACCGTTGTGTGGGTGGCCAACCGTGACCACCCTCTCAAAGACAACTCCACCAAGTTGATCATAACCAACGAGGGAAACCTCGTCCTTCTCACAAGGAATAACACAGTTCATTGGTCAACAAACACAACAACAAAGGCCTCAAGGCCCATTTTGCAACTCTTAAACACAGGAAACTTAGTACTTCGCAATGACGACGATGACAACAACAACAACAGTATTAGTAGCAGTAGCAGTAGTAGCAGCAACAACGAAGAGATGTTCTTGTGGCAAAGCTTTGACTACCCTAGTGACACATTGTTACCAGGAATGAAGCTAGGATGGAACAGAAAAACTGGTCTAAATCGACGTGTAACCGCTTGGAAGAACTGGGATGACCCTTCTCCTGGGAACTTCTCATGGGGCATCACATTTGACAGCAACCCTGAAATGGTTCTATGGAAGGGAACATTTAAGTACCATAGGAGTGGCCCTTGGAATGGTGTTCGGTTCAGTGGTGCATTTGGTGGCTCAAATAGGCTAAGCACACACCCTCTTTTCGTTTACAAATTAATCAACAATGATGATGAAGTGTACTACTCATACAGCCCCACCAACAAGTCCGTGATCTCAATAGTTGTCATGAACCAAACCCTTCTCCGTCGCCAACGCATCATTTGGGTCCCCGAAAACGGAACATGGAGGCTCTTCCAAACCGCGCCGAGAGATATTTGTGACACTTACAATCCGTGTGGCTCTTATGCGAATTGCATGGTTGATGCATCGCCGGTGTGTCAGTGTTTAGAAGGGTTTGAACCGAAATCTTCGGATACAATGGAACAAGGGTGTGTGAGAAGTGAACCGTGGAGCTGCAAGGTGGAAGGGAGAGATGGGTTTAGAAAATTTGTTGGGTTGAAGTTTCCGGATACTACACATTCTTGGGTTAATAGGAGTATGACACTGGAGGAATGCAAGGCTAAATGTTGGGAAAATTGTTCGTGCACAGCTTATGCAAACTTGGACATAAGAGGAGCAGGAAGTGGGTGTTCCATTTGGTTTGGTGATCTTATTGATTTGAAGGTTGTTTCACAAAGTGGGCAATCTATGTATATTCGAATGGCAGATTCACAGACAGATTCTAAAGATGCCCATAAGAAGAAGGAACTGTTGTTGATAGGTACGACTGTGCCTCCTATTGTTCTCGTGATTCTATTGGCAATCTTCTATTCTTACAGGAGAAAACGAAAGTATGAAGAAGAAAACGTGTCAGTAGTACAGAAAGATGAAGCAGGTGGACAAGAAGATAGTATGGAGCTACCGTTGTTTGATCTTGCTACAATAGTTAATGCCACCAACAACTTCTCAACTGACAACAAACTTGGCCAAGGCGGGTTCGGGCCTGTATACAAGGGTGTATTAGCAGACGGACAAGAAATTGCTGTCAAAAGGCTATCAAGGAGTTCTCGACAAGGATTAACAGAATTTAAGAATGAAGTTATATTGTGTGCCAAACTTCAACACCGAAATCTAGTTAAAGTTCTTGGTTGTTGCATTGAAGGAGAGGAGAAAATGCTTCTATATGAATACATGCCCAACAAAAGCCTAGATTCGTTTCTTTTTGATTCAACTAAAAGAAAGATTTTGGATTGGTCTAAGCGATTCCACATCGTATGTGCGACAGCTCGTGGACTTCTTTATCTTCATCAAGATTCTAGATTAAGGATAATACACCGAGATTTAAAAGCAAGCAATATTTTATTAGACAACAACTTGAACCCAAAAATTTCAGATTTTGGCTTGGCAAGAATGTGTGGGGGTGATCAAATTGAAGGAAACACAAACAGGGTTGTGGGAACATATGGCTACATGGCACCTGAATATGTTATTCATGGATTATTCTCCACAAAATCTGATGTATTTAGTTTTGGCATATTGTTGCTGGAAATCATTAGTGGAAAGAAAAACAGAGAGGTTACCTATCCATACCATAGTCATAATCTTATTGGGCATGCATGGAAGTTGTGGAAAGAAGGCAAACCAGGGGAATTGATTGATAATTGTTTGCAGGACTCATGTATCATATCAGAAGCCTTACGTTGCATTCACATTGGTCTTTTATGCCTTCAACGTCAACCTAATGATCGACCAAACATGGGGTCTGTAGTTATTATGTTAAGTAGTGATAATGAATTACCCCAACCAAAGGAACCTGGTTTCTTAATAGATCGGGTCTTAATTGAAGAAGAATCACCATTTAGATGTCAAACTTCTTCAACCAATGAAGTAACCATTTCAATCCTGAATGCTAGATAA 2499 0.413 MTIFTLTLVIANLLFLLSKASSTDTLTLSQSLPDGTTLVSKDETFELGFFSLRNSTNRYLGIWFKNIPIKTVVWVANRDHPLKDNSTKLIITNEGNLVLLTRNNTVHWSTNTTTKASRPILQLLNTGNLVLRNDDDDNNNNSISSSSSSSSNNEEMFLWQSFDYPSDTLLPGMKLGWNRKTGLNRRVTAWKNWDDPSPGNFSWGITFDSNPEMVLWKGTFKYHRSGPWNGVRFSGAFGGSNRLSTHPLFVYKLINNDDEVYYSYSPTNKSVISIVVMNQTLLRRQRIIWVPENGTWRLFQTAPRDICDTYNPCGSYANCMVDASPVCQCLEGFEPKSSDTMEQGCVRSEPWSCKVEGRDGFRKFVGLKFPDTTHSWVNRSMTLEECKAKCWENCSCTAYANLDIRGAGSGCSIWFGDLIDLKVVSQSGQSMYIRMADSQTDSKDAHKKKELLLIGTTVPPIVLVILLAIFYSYRRKRKYEEENVSVVQKDEAGGQEDSMELPLFDLATIVNATNNFSTDNKLGQGGFGPVYKGVLADGQEIAVKRLSRSSRQGLTEFKNEVILCAKLQHRNLVKVLGCCIEGEEKMLLYEYMPNKSLDSFLFDSTKRKILDWSKRFHIVCATARGLLYLHQDSRLRIIHRDLKASNILLDNNLNPKISDFGLARMCGGDQIEGNTNRVVGTYGYMAPEYVIHGLFSTKSDVFSFGILLLEIISGKKNREVTYPYHSHNLIGHAWKLWKEGKPGELIDNCLQDSCIISEALRCIHIGLLCLQRQPNDRPNMGSVVIMLSSDNELPQPKEPGFLIDRVLIEEESPFRCQTSSTNEVTISILNAR 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00791 832 CDD B_lectin 29 165 IPR001480 -
Pumo11g00791 832 Pfam D-mannose binding lectin 71 191 IPR001480 -
Pumo11g00791 832 Gene3D Phosphorylase Kinase; domain 1 474 591 - -
Pumo11g00791 832 ProSitePatterns Serine/Threonine protein kinases active-site signature. 637 649 IPR008271 GO:0004672|GO:0006468
Pumo11g00791 832 Pfam PAN-like domain 353 421 IPR003609 -
Pumo11g00791 832 PIRSF SRK 1 832 IPR024171 GO:0004674
Pumo11g00791 832 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 13 777 - -
Pumo11g00791 832 Gene3D - 18 162 IPR036426 -
Pumo11g00791 832 SMART ntp_6 356 435 IPR003609 -
Pumo11g00791 832 Pfam Protein tyrosine and serine/threonine kinase 518 784 IPR001245 GO:0004672|GO:0006468
Pumo11g00791 832 Gene3D Hepatocyte Growth Factor 352 435 - -
Pumo11g00791 832 SMART serkin_6 516 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g00791 832 ProSiteProfiles EGF-like domain profile. 303 339 IPR000742 -
Pumo11g00791 832 SMART blect_4 29 165 IPR001480 -
Pumo11g00791 832 SUPERFAMILY Protein kinase-like (PK-like) 499 787 IPR011009 -
Pumo11g00791 832 MobiDBLite consensus disorder prediction 132 151 - -
Pumo11g00791 832 Gene3D Transferase(Phosphotransferase) domain 1 592 798 - -
Pumo11g00791 832 CDD STKc_IRAK 522 787 - -
Pumo11g00791 832 ProSiteProfiles PAN/Apple domain profile. 353 436 IPR003609 -
Pumo11g00791 832 ProSiteProfiles Protein kinase domain profile. 516 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g00791 832 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 352 435 - -
Pumo11g00791 832 CDD PAN_AP_plant 352 436 - -
Pumo11g00791 832 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 592 795 - -
Pumo11g00791 832 ProSiteProfiles Bulb-type lectin domain profile. 23 144 IPR001480 -
Pumo11g00791 832 Pfam S-locus glycoprotein domain 224 337 IPR000858 GO:0048544
Pumo11g00791 832 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 480 591 - -
Pumo11g00791 832 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 196 IPR036426 -
Pumo11g00791 832 Pfam Domain of unknown function (DUF3403) 788 832 IPR021820 GO:0004674
Pumo11g00791 832 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 19 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00791 Pumo-Chr11 27571454 27574935 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00791 451 801 Receptor kinase-like Gene Family AT4G23230 53.977 7.25e-128 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo11g00791 PK_Tyr_Ser-Thr 3.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00791 - - gmx:100794112 1566.21