Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00789 ATGACAATTGAGGAATGCAGGGCCAAGTGCTGGGAAAATTGTTCTTGTATGGCTTATGCCAATTCAGACATCACTGAAAACGGAGATGGGTATAGCGGTTGCATCATCTGGTTAGGTGATTTATTGGATTTGAGACAGTTTCCAGATGCAGGGCAAGATCTATATGTTAGAGTCGATATCTCCTTAATAGATGAAGATGCTAAAGATGGATCAAAGAAACTGGTGGTTGTGGTGGCAAGCATTGTTTCATCTATTATTGCGATGCTTGTAGTATTCTCATTCATTTATCGGAGAAGTAAGACCAAATTTAGAGGCCAAGCAAAAATAAATGAGAGTGAAGAAGATCTAGAACTACCCTTGTTTGACTTTGATACAATAGCATGTGCTACTAGTGACTTCTCAAGTGACAACATGCTTGGCCAAGGTGGTTTTGGTCCAGTATATAGAGGCACATTGCCAGACGGACAAAATATTGCAATCAAAAGGCTTTCAGATACATCTGCACAAGGACTAAATGAATTTAAGAATGAGGTTATATTTTGTTCTAAGCTTCAACATCGAAATCTTGTCAAAGTCCTCGGCTATTGCATTGAAGAGCAGGAAAAATTACTCATCTATGAATACATGCCTAACAAAAGCCTAAACTTCTTTCTTTTTGATACTTCTCAAAGCAAACTTCTAGATTGGTCAAGGCGGTTAAACATTATAAGTGGAATTGCTCGAGGACTTCTTTATCTTCACCAAGACTCTAGATTGAGGATCATACACAGAGATTTAAAATCAAGTAATATTTTGTTAGATGATGATATGAATCCAAAAATTTCTGATTTTGGGTTAGCACGAGTGTGTAGAGGTGATCAGATTGAAGGGAATACAAGCAGAGTTGTTGGTACATATGGTTATATGGCCCCTAAATATGCAATTGGTGGAGTATTCTCCATAAAATCTGATGTTTATAGCTTCGGTGTTATATTACTCGAGGTTTTAAGCGGAAAGAAAAACAAAGGGTTTTCCTACTCAAGCCACAACTATAATCTTATTGCACATGCATGGAGATGTTGGAAAGAGCGCATCCCAATGGAATTCATTGATACTTGTTTAAGGGACTCATACATTCTATCGGAAGCCTTGCAATGCATTCATATTGGTCTTTTATGTGTGCAACATCAACCTAATGATAGACCAAATATGACATCTGTAGTTACAATGTTAACTAGTGAATGTGCTTTACCACAACCAAAAAAGCCTATTTTCTTATTAGAAAGTGTTTTAGTTGAGGAAGATTTTGGGCAAAATATGTACAATCCAACCAACGAAGTAACTATCTCAGAGTTGGAACCAAGATAA 1347 0.3697 MTIEECRAKCWENCSCMAYANSDITENGDGYSGCIIWLGDLLDLRQFPDAGQDLYVRVDISLIDEDAKDGSKKLVVVVASIVSSIIAMLVVFSFIYRRSKTKFRGQAKINESEEDLELPLFDFDTIACATSDFSSDNMLGQGGFGPVYRGTLPDGQNIAIKRLSDTSAQGLNEFKNEVIFCSKLQHRNLVKVLGYCIEEQEKLLIYEYMPNKSLNFFLFDTSQSKLLDWSRRLNIISGIARGLLYLHQDSRLRIIHRDLKSSNILLDDDMNPKISDFGLARVCRGDQIEGNTSRVVGTYGYMAPKYAIGGVFSIKSDVYSFGVILLEVLSGKKNKGFSYSSHNYNLIAHAWRCWKERIPMEFIDTCLRDSYILSEALQCIHIGLLCVQHQPNDRPNMTSVVTMLTSECALPQPKKPIFLLESVLVEEDFGQNMYNPTNEVTISELEPR 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00789 448 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 209 412 - -
Pumo11g00789 448 CDD PAN_AP_plant 1 58 - -
Pumo11g00789 448 Gene3D Transferase(Phosphotransferase) domain 1 209 412 - -
Pumo11g00789 448 SUPERFAMILY Protein kinase-like (PK-like) 116 404 IPR011009 -
Pumo11g00789 448 ProSiteProfiles PAN/Apple domain profile. 1 59 IPR003609 -
Pumo11g00789 448 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 3 419 - -
Pumo11g00789 448 CDD STKc_IRAK 139 405 - -
Pumo11g00789 448 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 97 208 - -
Pumo11g00789 448 SMART serkin_6 133 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g00789 448 Pfam PAN-like domain 1 44 IPR003609 -
Pumo11g00789 448 Pfam Protein tyrosine and serine/threonine kinase 136 404 IPR001245 GO:0004672|GO:0006468
Pumo11g00789 448 Gene3D Phosphorylase Kinase; domain 1 94 208 - -
Pumo11g00789 448 ProSitePatterns Serine/Threonine protein kinases active-site signature. 254 266 IPR008271 GO:0004672|GO:0006468
Pumo11g00789 448 ProSiteProfiles Protein kinase domain profile. 133 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00789 Pumo-Chr11 27556803 27559741 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00789 121 448 Receptor kinase-like Gene Family AT4G11530 54.599 6.10e-129 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo11g00789 PK_Tyr_Ser-Thr 2.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00789 - - gmx:100792537 784.637