Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00785 ATGAGTGGAATAGGAAAGACAACTCTTGGGCGTGCTGTATATGAAAGAATCTCTCATCAATATGATTTTCGTTGTTATATTGATGATGTAAGTAAAATTTATCGAGATTCTAGTACATTAGGTGTACAAAAGCAATTACTTTGTCAGTCTCTAGATGAAAAAAATCTAGAGATATGCAATGTATCCGAGGGAACAAGTTTGGTATGGACTAGGCTATGCAATGCAAGGGCTCTTATAGTTCTTGATAATGTTGATCAAGTTGGACAACTAAAGATGTTTACAGGGAGTAGAGATACTCTGTTACGTGAATGCCTAGGTGGTGGGAGCAAAATCATCATAATTTCTAGGGATAAACACATATTGAGGACATATGGAGTAGATGATGTTTACCAAGTTCAGGCATTAAATCACAAACATGCTGTTCAATTATTTTGCAGAAATGCTTTCAAAAGTAATTTTATTATGAGTGATTATAAAATGTTGACTTATGACGTACTATCGTATTGTCAAGGTCATCCCTTAGCAATTGAAGTATTGGGCTCATCATTGTTTGGTCGAGATGTCTTACAATGGAGTAGTGCATTGGCTAGGCTAAGAGAAAATAAAAGTAAAAATATTTTGGATGTGTTGCGAATAAGTTTTGATCAATTAGAAGACACAGATAAGGAAATATTTTTAGATATTGCTTGCTTCTTCAACTATGATGATGAGGAATGTGTGAAGAAAATTCTAGATATTCGTGGATTTCATCCTGAATATGGCCTACAAGTTCTCGTTGATAAATCACTCATAACCGTGATGGATGGTGAGGTTTATATGCATCGCTTGTTGGAGGATCTGGGCAAGTGTATTGTTCGAGAGAAATCACCTAAGGAGCCAAGAAAGTGGAGTAGGTTATGGGATTACAAAGATTTACAGAAAGTTATGCTAGACAATATGGTATCAGAAAATCTTGAAGCCATAGTTGTTGACTATCGGGAGGTACCGTACAATCCTAAAACACCAATAAAGGTTGATGCTCTATCAAAAATGAGTCACCTTAAGTTGCTCATACTTGAAGAAATGAAATATGCAGGAAGACTCGATAATCTTTCCAATGAATTAGGACACCTTTACTGGAAAGAATATCCTTTTCAGTGTTTGCCCCCAAGTTTTCAGCCGGACAGTCTTGTATGGCTGAGCCTGCCCTACAGCAATATCAAACAACTTTGGGAAGTCACAAAGCCTCTACCCAATTTGGTAATTTTAGATCTCAGTTACTCTGAAAATCTAATTGAGATGCCAGATATTAGAGAGGCCTTAAATCTTGAAGTGCTCAATCTCCAAGGATGTATACAACTCAGGCAGATCGATCCATCCATTGGTCTTTTAAGAAAGCTTGTTTTTTTGAATTTGGAAGGCTGCAGAAATCTAGTAAGCTTACCCAATGGCATATTGGACCTCAACTCTCTTAAATATTTGTATCTCTCCAACTGTTCAAAACTGGATAATATACACATATTAGATCAACCAAGGGATAAAGACCATTTGAAGAATATAGGTGAAGCTCCTATTCATTATTCCCAATCAGCATCTTCCTACTCCCGAGAAAATAAAAATTCAGTTAGTTGTTTGTCACCCTCCTCACCAATTTTCCCATGTATGTGTCTACTTGATCTAAGTTTCTGTAATTTACTTAAAATCCCTTATGCTATCAAAAATTTAAGTTGCTTAGAATGGCTAAATTTAAGTGGAAACAATTTTGCTACACTGCCCAACCTCAAGGAGCTTTCCAGACTGTGGTGCTTAAAGTTACAACATTGCAAGCAGTTGAAATATTTGCCTGAGCTCCCTTCACAAATTGACTTCCCAGAGCTTCTTTCACAAATTGACATGCCGCAGGAAAGAAAACGTCAATATATTGGACAACATGCAGGATTATACATTTTAAACTGCCCAGAACTAATTGAGAGGGAACGCTGCACTAGCCTTGCTTTATCAAGGATCATACAAACTGTTAAGGTGCTCCATCAGTTCTTAATGGATTATCGTCGATATTTATTTATTGGAAGCGTTACTCCTGGAAGTGAAATACCAAGGTGGTTCAACAATCAGCATGTAGGCACGGACAGTGTAATGACCATAGATGCATCTCCTGTTACGCATGACAATAATTGGATTGGCGCTGTGTGTTGTGCAGTATTCGTGATACGTCATGAAACTGTTAAAGATCCTCCCCAATCTGCTCCTTTAACTGATATATTTTGGGGCAATCTTTATGCAGAACTAGTTTCAGAAGAATCAGATCACAGGTGGCTATTCTTTGTCCGTCGAAGACAATTCTTTCGGAAAAGTGTTCACCAGGGCCTGGAATGGGCACTTAAAATACCTCCACACCTAGGTTGTCATGTTGAGGTGAAGAAATATGGGTATCGTTGGGTATATAAACAGGATCTAGGACTATCAAACTTAACTATGATGCATGGCAGAAATCTGTTGCCTAAGAAGCGCAAGTTTTCGGCAATTGAACAAAATGAAGGAAGAAATCAAGGAAAAAGAAGCAAAGGAAGAAATGATATATCATCAGCAAAATGGAGAAAGGATGATGCCAACTCCTCCCTGGAAAACACAGTCAAGTTATTGCAAAATCAATTTGCAAATCTGGCCCTATAG 2652 0.3759 MSGIGKTTLGRAVYERISHQYDFRCYIDDVSKIYRDSSTLGVQKQLLCQSLDEKNLEICNVSEGTSLVWTRLCNARALIVLDNVDQVGQLKMFTGSRDTLLRECLGGGSKIIIISRDKHILRTYGVDDVYQVQALNHKHAVQLFCRNAFKSNFIMSDYKMLTYDVLSYCQGHPLAIEVLGSSLFGRDVLQWSSALARLRENKSKNILDVLRISFDQLEDTDKEIFLDIACFFNYDDEECVKKILDIRGFHPEYGLQVLVDKSLITVMDGEVYMHRLLEDLGKCIVREKSPKEPRKWSRLWDYKDLQKVMLDNMVSENLEAIVVDYREVPYNPKTPIKVDALSKMSHLKLLILEEMKYAGRLDNLSNELGHLYWKEYPFQCLPPSFQPDSLVWLSLPYSNIKQLWEVTKPLPNLVILDLSYSENLIEMPDIREALNLEVLNLQGCIQLRQIDPSIGLLRKLVFLNLEGCRNLVSLPNGILDLNSLKYLYLSNCSKLDNIHILDQPRDKDHLKNIGEAPIHYSQSASSYSRENKNSVSCLSPSSPIFPCMCLLDLSFCNLLKIPYAIKNLSCLEWLNLSGNNFATLPNLKELSRLWCLKLQHCKQLKYLPELPSQIDFPELLSQIDMPQERKRQYIGQHAGLYILNCPELIERERCTSLALSRIIQTVKVLHQFLMDYRRYLFIGSVTPGSEIPRWFNNQHVGTDSVMTIDASPVTHDNNWIGAVCCAVFVIRHETVKDPPQSAPLTDIFWGNLYAELVSEESDHRWLFFVRRRQFFRKSVHQGLEWALKIPPHLGCHVEVKKYGYRWVYKQDLGLSNLTMMHGRNLLPKKRKFSAIEQNEGRNQGKRSKGRNDISSAKWRKDDANSSLENTVKLLQNQFANLAL 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00785 883 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 499 IPR044974 GO:0006952
Pumo11g00785 883 MobiDBLite consensus disorder prediction 834 861 - -
Pumo11g00785 883 Pfam NB-ARC domain 1 204 IPR002182 GO:0043531
Pumo11g00785 883 Gene3D - 1 127 IPR027417 -
Pumo11g00785 883 Gene3D - 134 218 IPR042197 -
Pumo11g00785 883 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 228 IPR027417 -
Pumo11g00785 883 ProSiteProfiles Leucine-rich repeat profile. 570 591 IPR001611 GO:0005515
Pumo11g00785 883 SUPERFAMILY L domain-like 326 609 - -
Pumo11g00785 883 Pfam C-JID domain 687 812 IPR045344 -
Pumo11g00785 883 PRINTS Disease resistance protein signature 71 85 - -
Pumo11g00785 883 PRINTS Disease resistance protein signature 408 424 - -
Pumo11g00785 883 PRINTS Disease resistance protein signature 169 183 - -
Pumo11g00785 883 Gene3D Ribonuclease Inhibitor 328 515 IPR032675 -
Pumo11g00785 883 Gene3D Ribonuclease Inhibitor 526 637 IPR032675 -
Pumo11g00785 883 SUPERFAMILY "Winged helix" DNA-binding domain 205 308 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00785 Pumo-Chr11 27394357 27397369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00785 1 614 WRKY Transcription Factor Family AT5G45050 31.464 9.97e-77 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00785 - - gsj:114416945 937.947