Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00780 ATGAATCCAAAAATTTCTGATTTTGGGTTAGCACGAGTGTGTAGAGGTGATCAGATTGAAGGGAATACAAGCAGAGTTGTTGGTACATATGGTTATATGGCCCCTAAATATGCAATTGGTGGAGTATTCTCCATAAAATCTGATGTTTATAGCTTCGGTGTTATATTACTCGAGGTTTTAAGCGGAAAGAAAAACAAAGGGTTTTCCTACTCAAGCCACAACTATAATCTTATTGCACATGCATGGAGATGTTGGAAAGAGCGCATCCCAATGGAATTCATTGATACTTGTTTAAGGGACTCATACATTCTATCGGAAGCCTTGCAATGCATTCATATTGGTCTTTTATGTGTGCAACATCAACCTAATGATAGACCAAATATGACATCTGTAGTTACAATGTTAACTAGTGAATGTGCTTTACCACAACCAAAAAGCCTATTTTCTTATTAG 453 0.3664 MNPKISDFGLARVCRGDQIEGNTSRVVGTYGYMAPKYAIGGVFSIKSDVYSFGVILLEVLSGKKNKGFSYSSHNYNLIAHAWRCWKERIPMEFIDTCLRDSYILSEALQCIHIGLLCVQHQPNDRPNMTSVVTMLTSECALPQPKSLFSY 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00780 150 SUPERFAMILY Protein kinase-like (PK-like) 1 138 IPR011009 -
Pumo11g00780 150 Gene3D Transferase(Phosphotransferase) domain 1 1 143 - -
Pumo11g00780 150 ProSiteProfiles Protein kinase domain profile. 1 148 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g00780 150 Pfam Protein tyrosine and serine/threonine kinase 4 135 IPR001245 GO:0004672|GO:0006468
Pumo11g00780 150 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00780 Pumo-Chr11 27071608 27072542 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00780 1 145 Receptor kinase-like Gene Family AT4G23150 52.740 3.61e-51 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo11g00780 PK_Tyr_Ser-Thr 1.1e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00780 - - pvu:PHAVU_011G152100g 270.011