Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00779 ATGAATATTCTCTTTCCTTTCATGCTTGTCATAACCAACCTACTTTTCTTCTCATCCAAAATTTCCTCCGAAACTGACACCCTAACCCAGTTTCAGCCACTTCCCGATGGAACCACCTTGGTTTCCAAAGAAGGAACCTACGAGTTGGGTTTCTTCAGCCCAGGTAGCTCCACAAACCGCTACCTAGGAATATGGTTCAAAAACATCCCAATAAAAACCGTGGTTTGGGTTGTCAACCGCGACAACCCAATCAACAACTCCACCAACACCACCAAGTTAACCATAACCAAAGAAGGAAACCTCGCCCTTCTCACCGCAAACAACACCGTTCACTGGTCAACAAATGCAACAGAAAAAGCCAGCAACGTTGTAGCACAGCTCTTGGACACAGGCAACTTGGTTGTAAGAGATGAAAAAGAGAACAATTCTGAAAACTACTTGTGGCAGAGCTTTGATTATCCTACAGACACACTTTTACCAGGAATGAAGCTAGGGTGGGAAGTAAGAACAGGTCTTAACAGATACCTCACTTCATGGAACAATTGGGAAGACCCATCTTCTGGTCACTTCGCTTACGGCGTGGCAAGAAGCAACATCCCCGAAATGCAACTATGGAATGGCTCCTCAGTGTTCTACAGAAGTGGCCCTTGGAGCGGCTTTCGATTCAGCGCTACACCAGCGTTGCAGCGCCGTTCGTTGGTAAACATTAATTTCGTGGACAACACTGAAGAGAGTTATTACCAACTCTTCCCGAGGAACAGGTCATTGATCATAAGAACGGTGGTTAACCAAACCGTTTACACTCTTCAGCGCTTCTTTTGGGACGAAGAAACCCAAAACTGGAAGCTGGATTTAGTTATTCCGAGGGATGATTTTTGCGGCTATAACCTCTGTGGCTCTTTCGGGTACTGCGCCGTGAAGGATAACTCCTCAGTGTGCGAGTGTTTACGTGGGTTTGAACCAAAATCACCACAAAATTGGTTTGAAAAGCATTGGAGTCAAGGGTGTGTGAATAGTAGTAAAACTTGGAGGTGTAAAGAGGAAAACAATGACGGTTTCGTTAAGATTAGTAACATGAAGGTCCCGGATACAAAAACATCATGGATGAATAGAAGTATGACAATTGAGGAATGCAAGGCCAAGTGCTGGGAAAATTGTTCTTGTACGGCTTATGCTAATTCAGACATCACTGAAAACGGAAGTGGTTATAGCGGTTGCATCATCTGGTTCGGTGATTTATTAGACTTGAGACACCTCCCAGATGCTGGGCAAGATCTATATGTTAGAGTTGATATCTCCAAAATAGATAATGATGACAACGATGGTTCAAAGATAGTGGTGGTTGTGGTCGCAAGCATTGTTTCATCTATTATTGCGATTCTTGTAGTATTCACATTCTTTTACTGGAGAAATAACACCAAATTTAGAGGCAAAGAGATCATCGAGCCAAAAGCAAAAACAAATGAGAGTGAAGAGGATTTAGAGCTACCTTTGTTTGACTTTGATACAATAGCATGTGCTACTAGTGACTTCTCAAGTGACAAGATGCTTGGCCAAGGTGGTTTTGGTCCTGTATATAGAGGCACATTACCAAACGGACAAGATATTGCAGTCAAAAGGCTTTCAGATACATCTGCACAAGGACTAAACGAATTTAAGAATGAGGTTATATTTTGTTCTAAACTTCAACATCAGAATCTTGTCAAAGTTCTTGGCTATTGCATTGAAGAGCAAGAAAAATTACTTATCTACGAATACATGCCTAACAAAAGCCTAGACTTCTTTCTTTTTGATACTTCACAAAGCAAACTTCTAGATTGGTCTAGGCGATTAAACATTATAAGCGGAATTGCTCGAGGACTTCTTTATCTTCACCAAGACTCTAGATTGAGGATCATACATAGAGATTTAAAATCAAGTAATATTTTGTTAGATAATGATATGAATCCAAAAATTTCTGATTTTGGGTTAGCTCGAATGTGTAGAGGTGATCAGATTGAAGGGAATACAAGCAGAGTTGTTGGTACATATGGTTATATGGCACCTGAATATGCAATTGGTGGAGTATTTTCCATCAAATCTGATGTCTATAGCTTCGGTGTTATATTACTAGAGGTTTTAAGCGGAAAGAAAAACAAAGAGTTTTGCTACTCAAGTCACAACTATAATCTTATTGGACATGCATGGAGGTGTTGGAAAGAGTGCATCCCAATGGAATTCATCGATACTTGTTTAGGGGACTTGTACATTCAATCTGAAGCCTCACGATGCATTCATATTGGTCTTTTATGTGTGCAACATCAACCTAATGATAGACCAAATATGACATCTGTAGTTACAATGTTAACTAGTGAAAGTGTTTTACCACAACCGAAAAAGCCTCCACTTCTTGATGGCAGCACATTGGTCTCCAACGATGGAACCTTCGAGCTGGGTTTCTTCACTCCCGGTAGTTCGCCAAACCGCTACGTCGGAATCTGGTTCAAAAACATCCCGACAAGAACAATAGTTTGGGTTGCCAACCGTGACAACCCTGCAAAAGATAAATCCAACATGTTGTCTCTAAGCAAAGAGGGAAACCTTGTACTCATCGGCCAGAACCGGTCTCTTGTCTGGTCGACAAATGCAACAAGAGCGGTTTTGAGTCCGGTTGTGCAGCTTTTAGACAACGGAAATTTGGTAATTAGAGACGAGAAGGAGAACAACAACATCAACAATGAAGAAAATTTTGTGTGGCAGAGCTTTGACTATCCTTGTGATACACTATTGCAAGGAATGAAGTTGGGGTGGAACCTTAAAACTGGTCTCAATAGGTATCTTACAGCTTGGAAAAATTGGGATGATCCATCTTCGGGAGATTTTACTTCAGGGTTGAAGCTTGGGACCAATCCTGAATTGGTTATATGGAAAGGCTCGGTTGAGTACTATAGGAGTGGTCCTTGGAATGGGATTTTTTCTAGTGGAGTGTTTGGATTCAGTCCTAATCCACTTTTCGAATATAAATATGTCGAAAATGAAGATGAAGTGTATGTGAGGTACACCCTCAAGAATAGTTCTGTGACTTCAATCATTGTTTTGAACCAAACCCTTTATCTTCGCCAACGCATTACATGGATTCCTCACACTAGGACTTGGAGTGTGTACCAATCTCTACCACAAGACAGTTGTGATGTTTACAATGTTTGTGGTGCATATGGGAATTGCATGATTAATGCATCCCCTGTGTGCCAATGCTTGGAGGGGTTCAAGCCAAAATCACCCCAAGATTGGAATCAAATGGATTGGACACAAGGGTGTGTGCATAGTGAACCATGGAGTTGTGGGGTCAAAAACAAAGATGGGTTTCGTAGAATTGCTGGGATGAAAATGCCAGATACTACACATTCTTGGATAAATAGAAGTATGACACTTGAAGATTGCAAGGCCAAATGCTTGGAAAATTGTTCCTGCACTGCTTATGCGAACTTGGACACTAGTGGGGGAGGTAGTGGTTGCTCCATTTGGTTTGGTGATCTTGTTGATTTGAGAATTTCAGAAAGTGGGCAAGATCTATATGTTCGAATGGCCATTTCAGACACGGGGAAAGACATTGTACATGCAGATGCTAAACATAAGCATTCAAAAAAGGTAGTCTTGGTGGTCGCAATCACAGTTTCTATAGTCCTTCTGATGCTATTGGCATTCTCCTATATCTACATGACCAAACTAAAGTATGAAGTAATCAAATATAAGCACTAG 3738 0.412 MNILFPFMLVITNLLFFSSKISSETDTLTQFQPLPDGTTLVSKEGTYELGFFSPGSSTNRYLGIWFKNIPIKTVVWVVNRDNPINNSTNTTKLTITKEGNLALLTANNTVHWSTNATEKASNVVAQLLDTGNLVVRDEKENNSENYLWQSFDYPTDTLLPGMKLGWEVRTGLNRYLTSWNNWEDPSSGHFAYGVARSNIPEMQLWNGSSVFYRSGPWSGFRFSATPALQRRSLVNINFVDNTEESYYQLFPRNRSLIIRTVVNQTVYTLQRFFWDEETQNWKLDLVIPRDDFCGYNLCGSFGYCAVKDNSSVCECLRGFEPKSPQNWFEKHWSQGCVNSSKTWRCKEENNDGFVKISNMKVPDTKTSWMNRSMTIEECKAKCWENCSCTAYANSDITENGSGYSGCIIWFGDLLDLRHLPDAGQDLYVRVDISKIDNDDNDGSKIVVVVVASIVSSIIAILVVFTFFYWRNNTKFRGKEIIEPKAKTNESEEDLELPLFDFDTIACATSDFSSDKMLGQGGFGPVYRGTLPNGQDIAVKRLSDTSAQGLNEFKNEVIFCSKLQHQNLVKVLGYCIEEQEKLLIYEYMPNKSLDFFLFDTSQSKLLDWSRRLNIISGIARGLLYLHQDSRLRIIHRDLKSSNILLDNDMNPKISDFGLARMCRGDQIEGNTSRVVGTYGYMAPEYAIGGVFSIKSDVYSFGVILLEVLSGKKNKEFCYSSHNYNLIGHAWRCWKECIPMEFIDTCLGDLYIQSEASRCIHIGLLCVQHQPNDRPNMTSVVTMLTSESVLPQPKKPPLLDGSTLVSNDGTFELGFFTPGSSPNRYVGIWFKNIPTRTIVWVANRDNPAKDKSNMLSLSKEGNLVLIGQNRSLVWSTNATRAVLSPVVQLLDNGNLVIRDEKENNNINNEENFVWQSFDYPCDTLLQGMKLGWNLKTGLNRYLTAWKNWDDPSSGDFTSGLKLGTNPELVIWKGSVEYYRSGPWNGIFSSGVFGFSPNPLFEYKYVENEDEVYVRYTLKNSSVTSIIVLNQTLYLRQRITWIPHTRTWSVYQSLPQDSCDVYNVCGAYGNCMINASPVCQCLEGFKPKSPQDWNQMDWTQGCVHSEPWSCGVKNKDGFRRIAGMKMPDTTHSWINRSMTLEDCKAKCLENCSCTAYANLDTSGGGSGCSIWFGDLVDLRISESGQDLYVRMAISDTGKDIVHADAKHKHSKKVVLVVAITVSIVLLMLLAFSYIYMTKLKYEVIKYKH 1245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00779 1245 CDD STKc_IRAK 517 783 - -
Pumo11g00779 1245 SMART ntp_6 348 430 IPR003609 -
Pumo11g00779 1245 SMART ntp_6 1110 1188 IPR003609 -
Pumo11g00779 1245 CDD B_lectin 795 918 IPR001480 -
Pumo11g00779 1245 ProSiteProfiles PAN/Apple domain profile. 1107 1189 IPR003609 -
Pumo11g00779 1245 CDD PAN_AP_plant 345 430 - -
Pumo11g00779 1245 SUPERFAMILY Protein kinase-like (PK-like) 493 792 IPR011009 -
Pumo11g00779 1245 Gene3D Transferase(Phosphotransferase) domain 1 587 790 - -
Pumo11g00779 1245 Gene3D Hepatocyte Growth Factor 1106 1189 - -
Pumo11g00779 1245 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 788 915 - -
Pumo11g00779 1245 Pfam S-locus glycoprotein domain 976 1086 IPR000858 GO:0048544
Pumo11g00779 1245 Pfam S-locus glycoprotein domain 212 323 IPR000858 GO:0048544
Pumo11g00779 1245 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1106 1188 - -
Pumo11g00779 1245 ProSiteProfiles EGF-like domain profile. 1052 1088 IPR000742 -
Pumo11g00779 1245 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 587 790 - -
Pumo11g00779 1245 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 476 586 - -
Pumo11g00779 1245 ProSitePatterns Serine/Threonine protein kinases active-site signature. 632 644 IPR008271 GO:0004672|GO:0006468
Pumo11g00779 1245 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 185 IPR036426 -
Pumo11g00779 1245 SMART serkin_6 511 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g00779 1245 FunFam Os04g0303100 protein 64 211 - -
Pumo11g00779 1245 SUPERFAMILY alpha-D-mannose-specific plant lectins 836 949 IPR036426 -
Pumo11g00779 1245 ProSiteProfiles PAN/Apple domain profile. 345 431 IPR003609 -
Pumo11g00779 1245 ProSiteProfiles Protein kinase domain profile. 511 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g00779 1245 ProSiteProfiles EGF-like domain profile. 289 325 IPR000742 -
Pumo11g00779 1245 Gene3D Phosphorylase Kinase; domain 1 473 586 - -
Pumo11g00779 1245 Pfam D-mannose binding lectin 73 179 IPR001480 -
Pumo11g00779 1245 Pfam D-mannose binding lectin 835 944 IPR001480 -
Pumo11g00779 1245 CDD B_lectin 32 154 IPR001480 -
Pumo11g00779 1245 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 21 151 - -
Pumo11g00779 1245 ProSiteProfiles Bulb-type lectin domain profile. 25 148 IPR001480 -
Pumo11g00779 1245 Pfam Protein tyrosine and serine/threonine kinase 514 781 IPR001245 GO:0004672|GO:0006468
Pumo11g00779 1245 FunFam Os04g0303100 protein 826 975 - -
Pumo11g00779 1245 CDD PAN_AP_plant 1106 1189 - -
Pumo11g00779 1245 Pfam PAN-like domain 345 416 IPR003609 -
Pumo11g00779 1245 Pfam PAN-like domain 1107 1175 IPR003609 -
Pumo11g00779 1245 SMART blect_4 793 918 IPR001480 -
Pumo11g00779 1245 SMART blect_4 31 154 IPR001480 -
Pumo11g00779 1245 ProSiteProfiles Bulb-type lectin domain profile. 787 908 IPR001480 -
Pumo11g00779 1245 Gene3D - 791 915 IPR036426 -
Pumo11g00779 1245 Gene3D - 19 151 IPR036426 -
Pumo11g00779 1245 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 9 773 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00779 Pumo-Chr11 27008566 27050827 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00779 436 824 Receptor kinase-like Gene Family AT4G23190 49.250 1.63e-120 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo11g00779 PK_Tyr_Ser-Thr 2.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00779 - - gmx:100792537 1370.14