Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00770 ATGAACCACGTCAACATCTCCATAGCCAAAGCCAATATGTTCCAAGGGGAAGGGGGAAGAGATCTTGGAATACAAATCTCAAGTGGCAACCTCTTCTCCGTCATGTACAAGAACGTTATTGGCACTAGAAAGATCTCGATGACGATGACGAGGATGATCTCGAAGAGGGCCTCATCATGTTCCTTACTCACCACCGTTTCCACCCCTAAGATCTGCTGTAGATCTCCAACTTTGAGTGAAAAAAAGATGAGGAGAAAAGGGCCATCAGAGGTGGTGGGTGGTGATAGAAAGGGAATGGTGGTGGTGGATCACCGCTTCAATAGGAAGAAATTAACAGGAATTGTGGCTGGCTGTACTATATTCATCATTGCCATTACAATAGTCGGAATATTGATATTTTGCATTAGGAGGAAGAAACTCAAGCAGTCAGATACAAATTATTGGAAAGACACGAGTAAGAAGGATGACATTGATTTACCAATATTTCACTTTTTATCCATCTCCAATGCAACAAATCACTTTTCAGAGAGTAACAAATTGGGACAAGGTGGCTTTGGACCTGTGTACAAGGGCATATTACCAGATGGGCAAGAGATTGCGGTTAAGAGACTTTCTAAAACTTCTGGACAAGATTCAAAAAGACGCACGTTATTAGGTTGGGCTAAGCGATTTGAAATTATTGGTGGAATTGCTCGAGGACTTCTCTATCTTCATCAAGATTCTAGACTAAAGATCATTCACAGGGATCTCAAGACTAGTAATGTTCTTCTTGATAGTGACATGAACCCAAAAATATCCGATTTTGGTATGGCTAGGACATTTGGGCTAGATCAAGATGAAGCAAACACAAATAGAGTGATGGGAACATATGGTTATATGCCTCCTGAATATGCTGTACATGGATATTTTTCAGTCAAATCTGATGTCTTTAGCTTTGGTGTGATTGTGTTGGAGATAATAAGTGGGAGGAAGAATAAGGGATTTTGTGACCCACGCAATCACCTAAATCTTCTTGGACATGCATGGAGACTATGGATTGAAAAAAGGCCAATGGAACTTATGGATGACTTAGTGGACAATCCAGTGGATCCATATGAAATATTAAGATTTATTCATATTGGTTTGTTATGCGTACAACAGAGACCGGAAGATAGGCCAAACATGTCTTCAGTAGTTTTAATGTTGAACGGTGAAAAGTTATTACCCGAGCCAAGTCAACCTGGGTTCTACACAGGAAGAGATAATTCAACCATGAGAGAATCCTCTTCAAGAAATTGTGATGCATATTCCCTCAACGAAATGTCTAACTCAGTGTTCGAGCCAAGATAG 1329 0.4033 MNHVNISIAKANMFQGEGGRDLGIQISSGNLFSVMYKNVIGTRKISMTMTRMISKRASSCSLLTTVSTPKICCRSPTLSEKKMRRKGPSEVVGGDRKGMVVVDHRFNRKKLTGIVAGCTIFIIAITIVGILIFCIRRKKLKQSDTNYWKDTSKKDDIDLPIFHFLSISNATNHFSESNKLGQGGFGPVYKGILPDGQEIAVKRLSKTSGQDSKRRTLLGWAKRFEIIGGIARGLLYLHQDSRLKIIHRDLKTSNVLLDSDMNPKISDFGMARTFGLDQDEANTNRVMGTYGYMPPEYAVHGYFSVKSDVFSFGVIVLEIISGRKNKGFCDPRNHLNLLGHAWRLWIEKRPMELMDDLVDNPVDPYEILRFIHIGLLCVQQRPEDRPNMSSVVLMLNGEKLLPEPSQPGFYTGRDNSTMRESSSRNCDAYSLNEMSNSVFEPR 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00770 442 SMART serkin_6 174 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g00770 442 Gene3D Transferase(Phosphotransferase) domain 1 161 209 - -
Pumo11g00770 442 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 211 438 - -
Pumo11g00770 442 Pfam Protein tyrosine and serine/threonine kinase 218 393 IPR001245 GO:0004672|GO:0006468
Pumo11g00770 442 MobiDBLite consensus disorder prediction 409 425 - -
Pumo11g00770 442 ProSiteProfiles Protein kinase domain profile. 86 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g00770 442 ProSitePatterns Serine/Threonine protein kinases active-site signature. 245 257 IPR008271 GO:0004672|GO:0006468
Pumo11g00770 442 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 202 403 - -
Pumo11g00770 442 MobiDBLite consensus disorder prediction 404 425 - -
Pumo11g00770 442 SUPERFAMILY Protein kinase-like (PK-like) 158 414 IPR011009 -
Pumo11g00770 442 Gene3D Transferase(Phosphotransferase) domain 1 210 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00770 Pumo-Chr11 26599108 26603125 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00770 126 442 Receptor kinase-like Gene Family AT4G23280 50.610 1.35e-101 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo11g00770 PK_Tyr_Ser-Thr 7.5e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00770 - - gmx:100802416 591.652