Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00766 ATGCTAGTCTGTTTTTCACTAGATGAAACCAAAAGGAAGTTGCTAGATTGGCATAAGCGTTTCAACATTATTAGTGGCATTGCTCGAGGACTTTTGTATCTTCATCAAGACTCTAGGCTGAGGATTATTCACAGAGACCTAAAAACTAGCAATATTTTACTGGATGCAAATTTGGATCCCAAAATATCAGACTTTGGCTTGGCTCGATCATTTTTGGGAGATCAAGTTGAGGCAAACACAAATAGGGTGGCTGGAACATATGGTTACATACCTCCTGAGTATGCTGCACGTGGGCATTTCTCTGTGAAATCAGATGTCTTTAGTTATGGTGTGATAGTACTAGAGATTGTAAGTGGGAAGAAAAACAGAGAATTTTCAGACCCAGAACATCATAATAATCTTCTTGGACATGCATGGAAATTATGGACTGAAGAGAGGGCACTAGAACTACTGGATGAAGTGTTAGGAGAACAATGCACCCCCTCTGAAGTCATACGATGCATACAGGTAGGCCTATTATGCGTGCAACAAAGACCACAAGATAGGCCAGATATGTCATCTGTAGTTTTAATGTTGAATGGTGATAAAACAACAAAGATTTTGTTGCCAAAGCCAAAGGTTCCTGCTTTTTACACTGAAAAAGATGTTACATCTGAAGCAAATTCTTCATCTGCAAATCACATATCGCTTTCAGTTAATGAACTTTCCATCACAACATTAGATGCAAGATAG 732 0.388 MLVCFSLDETKRKLLDWHKRFNIISGIARGLLYLHQDSRLRIIHRDLKTSNILLDANLDPKISDFGLARSFLGDQVEANTNRVAGTYGYIPPEYAARGHFSVKSDVFSYGVIVLEIVSGKKNREFSDPEHHNNLLGHAWKLWTEERALELLDEVLGEQCTPSEVIRCIQVGLLCVQQRPQDRPDMSSVVLMLNGDKTTKILLPKPKVPAFYTEKDVTSEANSSSANHISLSVNELSITTLDAR 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00766 243 Pfam Domain of unknown function (DUF3403) 197 243 IPR021820 GO:0004674
Pumo11g00766 243 FunFam - 4 201 - -
Pumo11g00766 243 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 8 243 - -
Pumo11g00766 243 SMART serkin_6 3 190 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g00766 243 ProSitePatterns Serine/Threonine protein kinases active-site signature. 42 54 IPR008271 GO:0004672|GO:0006468
Pumo11g00766 243 ProSiteProfiles Protein kinase domain profile. 1 202 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g00766 243 SUPERFAMILY Protein kinase-like (PK-like) 10 222 IPR011009 -
Pumo11g00766 243 Gene3D Transferase(Phosphotransferase) domain 1 5 202 - -
Pumo11g00766 243 Pfam Protein kinase domain 15 187 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00766 Pumo-Chr11 26243558 26262331 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00766 2 243 Receptor kinase-like Gene Family AT4G23140 51.587 5.92e-87 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo11g00766 Pkinase 1.2e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00766 - - gmx:100776576 423.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g00766 11 26243558 26262331 Pumo11g00766 11 26243558 26262331 ECH