Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00765 ATGCCTCCTGAGTATGCTGCCCATGGGCATTTCTCAGTGAAATCAGATGTCTTTAGTTTTGGTGTAATAGTACTGGAGATTGCATGGAGATTATGGACTGAAGAGAGGGCACTAGAACTACTGGATGAGTTGTTAGGAGAACAATGCTCACCCTCTGAAGTCACTCGATGCATACAGGTAGGCCTATTATGTGTGCAGCAAAGACCAAAAGACAGGCCAGACATGTCATCAGTGGTTTTAATGTTGAATGGTGAGAAATTATTGCCAAAGCCAAAGGTTCCTGGATTTTACAATGAGACAGACGTTAAATCTGAAGCAAATTCTTCATTGGAAAATCACATACTATGCTCAGTTAATGAACTTTCTATCACGATACTAGATGGAAGATAG 390 0.4077 MPPEYAAHGHFSVKSDVFSFGVIVLEIAWRLWTEERALELLDELLGEQCSPSEVTRCIQVGLLCVQQRPKDRPDMSSVVLMLNGEKLLPKPKVPGFYNETDVKSEANSSLENHILCSVNELSITILDGR 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00765 129 Pfam Domain of unknown function (DUF3403) 88 129 IPR021820 GO:0004674
Pumo11g00765 129 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 129 - -
Pumo11g00765 129 Pfam Protein tyrosine and serine/threonine kinase 1 80 IPR001245 GO:0004672|GO:0006468
Pumo11g00765 129 SUPERFAMILY Protein kinase-like (PK-like) 1 89 IPR011009 -
Pumo11g00765 129 Gene3D Transferase(Phosphotransferase) domain 1 1 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00765 Pumo-Chr11 26238564 26239092 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00765 1 129 Receptor kinase-like Gene Family AT4G23140 43.226 8.53e-35 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo11g00765 PK_Tyr_Ser-Thr 5.8e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00765 - - gmx:100784066 207.994