Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00754 ATGACATTCACTTCTACCCTCACATCCTTGACAGCATTGCTTTGCCTATGTATGTTTTGTGTGAATGCAATTACCTACAAAGAATTTCTGCGAACGGAGCATTCCTTGGGAACCTCAGACATTATTCTTTCTAAAAGTGGGAATTTTGAACTTGGTTTTTTCTACAGAATCAGGGAGAACACCACCAAGTACTATGTAGGCATAAGGAATAGAAAGGTTCCAAACGACAGGATTGTGTGGGTTGCTAACAGAGACTATGCAGTTCAATCATCTTCAGCAGTTCTTACTATTCAACCTGATGGAAATATTGTGATCGTAGATGGACAAGTGGCATACCGCGTGAACAAGGCTTCAAACAATTTTAGTACCTTCGCCATGCTCTTGGTTTCGGGAAACTTGGTGCTTCTGAACACGTCGAATCAAGCGATTTTGTGGCAGAGTTTTGATAATCCTACGGATACCCTTTTACCTGGAATGAACCTAGGATATGATAGTGTCTTAGGTTACACTTGGTCATTGAAATCATGGACAAGTGCAGACGACCCTGCCCCAGGAGCTTTTTCCCTCAAGTATGATTCTGGCGGGGCCAGTCTAATCGTGAACAATGGTTCTAATGTGTTTTGGATTGATTATCGTTCCAATGATACTATTGACAATGTTCTTAGACGAAGTGGTGTGGATGACTATTATGACTATTTCACTTGGCCGGTTGGCAATGACTCTAGGCTGGTACTAGAAGTGTCTGGGGAGCTCAACCAGGAGTATTGGTCAGAGAAAGAAAATAGTTGGGTTTCTATTCAGTCATCAAAGTGTGGAACCAACAATTCCTGTGGAGTTTTTTCCATTTGTAACCCGCAAGCTCTTGACCCTTGTGACTGTCTCTATGGTTTCAAGCCGTTTGATGCTGATTCTTGGATTAAGGGGGACACATCTGCTGGCTGTGTCAGGAAAACTGAATTGTCCTGCAGCAGCAGAAGCAGTAATACTGTTAAATCCGATGATGGATTCTTCCAGTTCAATAAAGTTCAATTACCACAAACTTTTAACGGATACAGCAAGATAAAGATCGATACAGCAAGAGGGTGCGAAATTACTTGTTCTAGAAATTGTTCTTGTGTTGCTTATGCTTATGATTTGAACGGTAACTGCCACTTGTGGATTGGTCAGGTATTGAATCTAAAGAACATCTCAACGTATGTCTACAATTCTGATAATACCAATCCAATTTTTTACCTCAGACTTGCTGCTGCAGAATTGGTTACTGCTGATTCAAACACAACAAATGCAAAAGAACCAGCAAATGATTTGCGCAAGCATGAAAACTGGCTGAGAAATCTACTTCTGATTGTTATACTGATCTCACTTCTAGTGTTTCTTATATTGGGCCTATTCGTTTACTGGACAAGAAGGCAAAGGAGGAAAGGGGAAGATTTGCTACATTTTGATGTAAGCATGAGCATTAAAGTTGAAGATTCTGAGCTTACTGAAGCACATAGGGGTGCGAAAGTTAAGAAGAAGGAAGTCAAATTGCCATTATTCAGTTTTGTGAGTGTTGCAGCAGCAACTAATAATTTTTCAGATGCAAATAAACTTGGTGAGGGTGGCTTTGGACCTGTTTACAAGGGTATATTGTTGAATGGGGATGAGGTTGCTGTAAAGAGGCTATCACGAAGATCTGGTCAAGGATGGGAAGAGCTGAGAAATGAAGCCTTATTAATTGCAAAACTCCAACACAACAATCTTGTTAGACTTCTAGGCTGCTGCATTGATCGAGATGAAAAGATGCTGATTTATGAATTTATGCCTAATAAAAGCTTGGATGTTTTCCTTTTTGATGCAACAAAAAGAAGGATGCTAGATTGGGGAACACGAGTTAGGATAATTGATGGGATTGCCCAAGGAATCCTTTATCTTCATCAGTATTCCAGGTTCCGGATCATTCACCGAGATTTAAAAGCTAGCAACATATTGTTAGACACCAACATGAATCCTAAAATATCAGATTTTGGAATGGCAAGAATATTTGGTGAGAATGAACTTCAAGCAAATACAAACCGTATTGTTGGCACATATGGCTACATGTCCCCTGAATATGCTATGGAAGGTGTTTTCTCAATAAAATCGGACGTGTTTAGCTTTGGAGTCCTTTTGTTGGAGATTGTAAGTGGCAAGAAGAATACTGGCTTTTATCAAACAAATTCCTTCAATCTTCTTGGATATGCTTGGGATCTATGGACAAACAATTCAGGAATGGACCTAATGGATCCAGCACTGGATGATAGTGATACCATAAGTAGTAGTAAGCATACAGTACCAAGATATGTGAACATAGGACTTCTGTGTGTTCAAGAAAGTCCAGCAGATAGGCCAACCATGTCTGATGTTGTATCAATGATTGGGAATGACACTGTGGCCCTTCCTTCTCCTAAACCACCTGCTTTTCTAAATGTGAGAGGTAATCAAAATTCAGTATTATCCAGTAGCATGCCAGAAAGCTTTTCTGTGAATCTTATCACAGATACACTTGTGGAAGCAAGATGA 2541 0.4002 MTFTSTLTSLTALLCLCMFCVNAITYKEFLRTEHSLGTSDIILSKSGNFELGFFYRIRENTTKYYVGIRNRKVPNDRIVWVANRDYAVQSSSAVLTIQPDGNIVIVDGQVAYRVNKASNNFSTFAMLLVSGNLVLLNTSNQAILWQSFDNPTDTLLPGMNLGYDSVLGYTWSLKSWTSADDPAPGAFSLKYDSGGASLIVNNGSNVFWIDYRSNDTIDNVLRRSGVDDYYDYFTWPVGNDSRLVLEVSGELNQEYWSEKENSWVSIQSSKCGTNNSCGVFSICNPQALDPCDCLYGFKPFDADSWIKGDTSAGCVRKTELSCSSRSSNTVKSDDGFFQFNKVQLPQTFNGYSKIKIDTARGCEITCSRNCSCVAYAYDLNGNCHLWIGQVLNLKNISTYVYNSDNTNPIFYLRLAAAELVTADSNTTNAKEPANDLRKHENWLRNLLLIVILISLLVFLILGLFVYWTRRQRRKGEDLLHFDVSMSIKVEDSELTEAHRGAKVKKKEVKLPLFSFVSVAAATNNFSDANKLGEGGFGPVYKGILLNGDEVAVKRLSRRSGQGWEELRNEALLIAKLQHNNLVRLLGCCIDRDEKMLIYEFMPNKSLDVFLFDATKRRMLDWGTRVRIIDGIAQGILYLHQYSRFRIIHRDLKASNILLDTNMNPKISDFGMARIFGENELQANTNRIVGTYGYMSPEYAMEGVFSIKSDVFSFGVLLLEIVSGKKNTGFYQTNSFNLLGYAWDLWTNNSGMDLMDPALDDSDTISSSKHTVPRYVNIGLLCVQESPADRPTMSDVVSMIGNDTVALPSPKPPAFLNVRGNQNSVLSSSMPESFSVNLITDTLVEAR 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00754 846 SUPERFAMILY Protein kinase-like (PK-like) 508 798 IPR011009 -
Pumo11g00754 846 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 601 807 - -
Pumo11g00754 846 CDD STKc_IRAK 531 799 - -
Pumo11g00754 846 ProSitePatterns Serine/Threonine protein kinases active-site signature. 646 658 IPR008271 GO:0004672|GO:0006468
Pumo11g00754 846 SMART serkin_6 525 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g00754 846 Pfam Domain of unknown function (DUF3403) 801 846 IPR021820 GO:0004674
Pumo11g00754 846 Pfam PAN-like domain 331 392 IPR003609 -
Pumo11g00754 846 Gene3D - 22 148 IPR036426 -
Pumo11g00754 846 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 122 820 - -
Pumo11g00754 846 Pfam S-locus glycoprotein domain 230 299 IPR000858 GO:0048544
Pumo11g00754 846 ProSiteProfiles Protein kinase domain profile. 525 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g00754 846 SMART blect_4 33 151 IPR001480 -
Pumo11g00754 846 Pfam Protein tyrosine and serine/threonine kinase 529 798 IPR001245 GO:0004672|GO:0006468
Pumo11g00754 846 SMART ntp_6 331 406 IPR003609 -
Pumo11g00754 846 Gene3D Transferase(Phosphotransferase) domain 1 601 805 - -
Pumo11g00754 846 Gene3D Phosphorylase Kinase; domain 1 485 600 - -
Pumo11g00754 846 ProSiteProfiles Bulb-type lectin domain profile. 27 148 IPR001480 -
Pumo11g00754 846 PIRSF SRK 1 846 IPR024171 GO:0004674
Pumo11g00754 846 ProSiteProfiles PAN/Apple domain profile. 322 415 IPR003609 -
Pumo11g00754 846 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 182 IPR036426 -
Pumo11g00754 846 CDD B_lectin 35 151 IPR001480 -
Pumo11g00754 846 Pfam D-mannose binding lectin 78 176 IPR001480 -
Pumo11g00754 846 CDD PAN_AP_plant 318 415 - -
Pumo11g00754 846 FunFam Uncharacterized protein 501 600 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00754 Pumo-Chr11 25451181 25455486 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00754 447 815 Receptor kinase-like Gene Family AT4G23190 51.206 8.12e-126 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo11g00754 PK_Tyr_Ser-Thr 9.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00754 - - gmx:100811148 1375.53