Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00753 ATGGGGCAATCATTGGGAACCTTAGACACCGTTCTTTCTTATGGTGGAAACTTCGAGTTGGGCTTTTTCCCCAGAAAGAACTTCACCAAGTACTATGTAGGCATATGGTATAAAAGGGTTCCAAAAGACAAGATTGTGTGGGTTGCTAACAGAGAGAACCCAGTTCAAACATCCTCAGCAATTCTTATTATTCAACCTGATGGAAACATTATGATCATAGATGGACAACTGACATACCGTGTGAACAAGGCTTCAAACAATTTTAGTACCTATGCCACGATTTTGGATTCTGGAAACTTGGTACTTCTGAACACCTCGAATCAAGCGATTTTGTGGCAGAGTTTTGATGACCCTACGGATACCCTTATACCTGGAATGAACCTAGGATATAATTCAGGTAACACATGGTCATTGAGATCATGGACAAGTGCAGATGACCCTGCCCCAGGAGCATTTTCCCTCGAGTATTTTTCTGGGGCCAGCCTAACCATCTACAATGGTTCTGATGTATATGCTTATTATTTGAAAGGTAGTATCTGCCAGCTGTGGCTTGGTCAGGTATTGAGTATAAAAAACATCTCAACATATGTGGACGATTCTGATAATACCAATCCAATTTTTTACCTCAGACTTGCTGCCTCAGAATTGGTTACTGCTGATTCAAACACAACAAATGCAAAAGAACCAGCAAATGATTTTCGGAAACATGAAAACTGGCTGAGGAATCTACTTCTGATTGTTATTGTGATCTCACTTCTAGTGTTGCTTATATTGGGCCTATTCGTTTACTGGACAAGAAGGCAAAGGAGGAAAGGGGAAGATTTGCTACATTATGATGTAAGCATGAACATTAAAGTTGAAGATTCTGAGATTACTGAAGCACATAGGGGTACGAAAGTTAAGAAGAAGGAAGTCAAATTGGCATTATTCAGTTTTGTGAGTGTTGCAGCAGCAACTAATAATTTTTCAGATGAAAATAAACTTGATGAGGGTGGCTTTGGACCTGGCATATTATTGAATGGGGATGAGGTTGCAGTAAAAAGACTATCGCGAAGATCTGGTCAAGGATGGGAAGAGCTGAGAAATGAAGCCTTATTAATTGCAAAACTCCAACACAACAATCTTGTTAGACTTCTAGGCTGCTGCATTGAACGAGATGAAAAGATGCTGATTTATGAATTTATGCCTAATAAAAGCTTGGATGTTTTCCTTTTTGATGCAACGAAAAGAAGGATGTTAGATTGGGGAACACGAGTTAGGATAATTGATGGGATTGCCCAAGGAATCCTTTATCTTCATCAGTATTCCAGGTTCCGGATCATTCACCGAGATTTAAAAGCTAGCAACATATTGTTAGATACCAACATGAATCCTAAAATATCAGATTTTGGAATGGCAAGAATATTTGGTGAGAATGAACTTCAAGCAAATACAAACCGAATAGTTGGAACATATGGATACATGTCCCCTGAATATGCTATGGAAGGCCTTTTCTCCATAAAATCGGATGTGTTTAGCTTTGGGGTTCTTTTGTTGGAGATTGTAAGTGGCAAGAAGAATACCGGCTTTTATCAAACAAAATCCTTCAATCTTCTTGGATATGCTTGGGATCTATGGACAAACAATTCGGGAATGGACCTAATGGATCCAGCATTGGATGACAGTGATAGCACCAGTAGTAGTAGGCATACAGTACCAAGATATGTGAACATAGGACTTCTGTGTGTTCAAGAATGTCCAGCAGATAGGCCAACCATGTCTGATGTTGTATCAATGATTGGGAATGACACTGTGGCCCTTCCTTCTCCTAAACCACCTGCTTTTCTAAATGTGAGAGGTAATCAAAATTCAGTATTGCCCTGTAAAGCTTTTCTGTGA 1878 0.3951 MGQSLGTLDTVLSYGGNFELGFFPRKNFTKYYVGIWYKRVPKDKIVWVANRENPVQTSSAILIIQPDGNIMIIDGQLTYRVNKASNNFSTYATILDSGNLVLLNTSNQAILWQSFDDPTDTLIPGMNLGYNSGNTWSLRSWTSADDPAPGAFSLEYFSGASLTIYNGSDVYAYYLKGSICQLWLGQVLSIKNISTYVDDSDNTNPIFYLRLAASELVTADSNTTNAKEPANDFRKHENWLRNLLLIVIVISLLVLLILGLFVYWTRRQRRKGEDLLHYDVSMNIKVEDSEITEAHRGTKVKKKEVKLALFSFVSVAAATNNFSDENKLDEGGFGPGILLNGDEVAVKRLSRRSGQGWEELRNEALLIAKLQHNNLVRLLGCCIERDEKMLIYEFMPNKSLDVFLFDATKRRMLDWGTRVRIIDGIAQGILYLHQYSRFRIIHRDLKASNILLDTNMNPKISDFGMARIFGENELQANTNRIVGTYGYMSPEYAMEGLFSIKSDVFSFGVLLLEIVSGKKNTGFYQTKSFNLLGYAWDLWTNNSGMDLMDPALDDSDSTSSSRHTVPRYVNIGLLCVQECPADRPTMSDVVSMIGNDTVALPSPKPPAFLNVRGNQNSVLPCKAFL 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00753 625 SMART serkin_6 322 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g00753 625 FunFam Uncharacterized protein 298 394 - -
Pumo11g00753 625 SUPERFAMILY alpha-D-mannose-specific plant lectins 45 147 IPR036426 -
Pumo11g00753 625 Gene3D Transferase(Phosphotransferase) domain 1 395 599 - -
Pumo11g00753 625 ProSiteProfiles Bulb-type lectin domain profile. 1 115 IPR001480 -
Pumo11g00753 625 Pfam Protein tyrosine and serine/threonine kinase 342 592 IPR001245 GO:0004672|GO:0006468
Pumo11g00753 625 Gene3D - 1 115 IPR036426 -
Pumo11g00753 625 SUPERFAMILY Protein kinase-like (PK-like) 306 592 IPR011009 -
Pumo11g00753 625 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 97 610 - -
Pumo11g00753 625 SMART blect_4 2 118 IPR001480 -
Pumo11g00753 625 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 395 601 - -
Pumo11g00753 625 Pfam D-mannose binding lectin 45 141 IPR001480 -
Pumo11g00753 625 Gene3D Phosphorylase Kinase; domain 1 296 394 - -
Pumo11g00753 625 ProSitePatterns Serine/Threonine protein kinases active-site signature. 440 452 IPR008271 GO:0004672|GO:0006468
Pumo11g00753 625 CDD B_lectin 10 118 IPR001480 -
Pumo11g00753 625 ProSiteProfiles Protein kinase domain profile. 322 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g00753 625 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00753 Pumo-Chr11 25374047 25377715 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00753 244 609 Receptor kinase-like Gene Family AT4G23190 51.743 1.48e-123 376
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo11g00753 PK_Tyr_Ser-Thr 2.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00753 - - gmx:100811148 789.26