Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00750 ATGGGGGAGTCATCATGTGTGTTGTGCGAGAAGAGGGCGATGATGCTGTGCGACTCGGACCAGGCTAAGCTGTGCTGGGACTGCGACGAGAAAGTTCACAGCGCCAATTTCTTGGTGGCTAAACATTCGAGGGTTCTTCTCTGTCGTTTGTGCCACTCCCCCACTCCGTGGAAGGCTTCGGGGACGAAACTCACGCCCACGGTGTCGTTTTGTCACCGCTGCGTCGCGGATCGAAACGCGAGGTGTGACCAATTGGGGAACAGTGATCAACGACAACAACAACAACATCGTGATTGTGTGGAGGATGATGCGGAACATGGTTCTGATCATGTTTTTGATGATGATGATTATAGTGATGATGATAGTGGTGATGAAGAAGAAGAAGAAGAAGAAGAGGAGGATGAGGATGAGGAAGGGGAGAATCAAGTGGTTCCAATGTCCTCTGGTTCTGCCACGTCACCACCCAGTCCCAGTGGTGCCGGTTTCGCATTGAAGCGATTAAGAAACAACTCTTTTTCTGTCGATTCTTCACATGATGAGACAGCATGCTCTTCATCTGAGATGCTTAGTTCTACATTGCCCAGTGGTGATGAATCAACCTCTATGAGTGTATTGAAGAGGCATCGAGTTGATCAGCGAAATTATTGA 648 0.4892 MGESSCVLCEKRAMMLCDSDQAKLCWDCDEKVHSANFLVAKHSRVLLCRLCHSPTPWKASGTKLTPTVSFCHRCVADRNARCDQLGNSDQRQQQQHRDCVEDDAEHGSDHVFDDDDYSDDDSGDEEEEEEEEEDEDEEGENQVVPMSSGSATSPPSPSGAGFALKRLRNNSFSVDSSHDETACSSSEMLSSTLPSGDESTSMSVLKRHRVDQRNY 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00750 215 SMART bboxneu5 1 47 IPR000315 GO:0008270
Pumo11g00750 215 CDD Bbox1_BBX-like 6 47 - -
Pumo11g00750 215 MobiDBLite consensus disorder prediction 114 141 - -
Pumo11g00750 215 MobiDBLite consensus disorder prediction 143 157 - -
Pumo11g00750 215 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 5 196 - -
Pumo11g00750 215 Pfam B-box zinc finger 4 46 IPR000315 GO:0008270
Pumo11g00750 215 MobiDBLite consensus disorder prediction 85 215 - -
Pumo11g00750 215 MobiDBLite consensus disorder prediction 169 201 - -
Pumo11g00750 215 MobiDBLite consensus disorder prediction 94 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00750 Pumo-Chr11 25229416 25232423 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00750 1 95 C2C2-CO-like Transcription Factor Family AT5G54470 56.842 3.62e-31 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pumo11g00750 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00750 - - gmx:100818267 282.337