Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00745 ATGACTACAACTTCAACTTCAGTAGACCATTTAGCTGTGAGTGAATCTATCCGAAATGGTGAGACTTTGATTTCTGCAGGTGGAATTACTGAACTGGGTTTCTTTAACCCAGTAAATTCAACAAGGCGATACTTGGGTATATGGTACAGAAATGTATCTCCTTTAACAGTGGTGTGGGTGGCTAACCGAAATACACCTCTTGAGAATAACTCAGGAGTTCTCAAACTCAATGAAAAAGGGATTCTTGTGCTTCTCAATGCTACAAACAGCACCATTTGGTCATCATCCAACATATCAACCAAAGCTGGGACTAATCCAATTGCTCGTCTCTTGGATTCGGGAAATTTTGTGGTGAGAAATGGACAGGAAACCAACGAGGAGGGTGTCTTGTGGCAGAGTTTTGATCATCCGTGTGATACACACATGCCAGAAATGAAAATTGGATGGAACTTAGAGACTGGTCAAGAAAGATCTGTGTCATCTTGGAAAAGTCATGATGATCCTGCTGAGGGAGAATATGCTTTTAAAATGGATCTTAGAGGATATCCTCAATTAATGTTGTTCAAGGGAGCTGATATAAAATCGAGAGCAGGGTCATGGAATGGCTTCTCTCTAGTTGCATATCCTGTTCCAAATCATGATGACACTAAACCAAAATTTGTGTTCAATGAAAAAGAGGTGTATTATGAGTATGTGCTTCTTGATAAATCGGTCTTCTTTGTGTATACACTGACCCCGGCAGGCACAGGGCATAGTTTGTTTTGGACAACTCAATCGAGAACCAGACAACTGGTCTCAACTGGGGAGAATGATCAATGTGAGAATTATGCCTTTTGTGGTGCAAATTCTATATGTATTTTTGATGCTAACCATCTAACTTGTGAATGCCTGAGAGGGTATGTTCCCAAGTCTCCTGATCAATGGAATATGTCAATTTGGAAAAATGGTTGTGTTCCAAGGAATAAATCTAGTTGCGAAAACAGTTATACAGATGGCTTCTTAAAGTACACACACATGAAATTGCCAGACACTTCTTCATCATGGTTTGATGCAACCATGAACCTTGATGAATGTCAGAAGTCATGTCTTAAAAACTGTTCTTGTACAGCATGTGCAAATTTAGATATCCGTGATGGAGGAAGTGGCTGTCTACTTTGGTTTAATAATCTAGTTGACTTGAGGAATTTCTCTCAATTGGGACAAGACTTTTATATCAGAGTCCCTGCTTCAGAATTAGATCATGCTGGCCATGGAAACACCAAGTTAAAGATAGTAGGAATCACAGTTGGTGTGATTATTTTCGGATTAGTCACATGTGCATGCATATTTATAATAAAAAATCCAGGGACAGCAAGAAAACTTTGCAGCAAGCATTACAAAATTAGACAGAGAAAGGAAGATGCTGATTTTCCAACTTTCCATTTCTCAGTCTTAGCTAATGCTACTGAAAACTTTTCAACCCAGAACAAGCTTGGGGAAGGTGGCTTTGGACCAGTATACAAGGGCACATTGATAGATGGACAAGAGTTAGCTGTAAAAAGACTTTCAAAGGAGTCTGGACAAGGGTTAGAAGAGTTCAAAAATGAAGTAGCGTTGATTGCGAAACTTCAGCACCGTAATCTTGTAAAGCTTCTGGGTTGTTGCATCGAAGGAGAAGAAAAAATGTTAATTTATGAATACATGCCTAACAAAAGCTTGGACTTCTTTGTTTTTGGTTCGAGCCCTTATGATTTATTCTAA 1740 0.3908 MTTTSTSVDHLAVSESIRNGETLISAGGITELGFFNPVNSTRRYLGIWYRNVSPLTVVWVANRNTPLENNSGVLKLNEKGILVLLNATNSTIWSSSNISTKAGTNPIARLLDSGNFVVRNGQETNEEGVLWQSFDHPCDTHMPEMKIGWNLETGQERSVSSWKSHDDPAEGEYAFKMDLRGYPQLMLFKGADIKSRAGSWNGFSLVAYPVPNHDDTKPKFVFNEKEVYYEYVLLDKSVFFVYTLTPAGTGHSLFWTTQSRTRQLVSTGENDQCENYAFCGANSICIFDANHLTCECLRGYVPKSPDQWNMSIWKNGCVPRNKSSCENSYTDGFLKYTHMKLPDTSSSWFDATMNLDECQKSCLKNCSCTACANLDIRDGGSGCLLWFNNLVDLRNFSQLGQDFYIRVPASELDHAGHGNTKLKIVGITVGVIIFGLVTCACIFIIKNPGTARKLCSKHYKIRQRKEDADFPTFHFSVLANATENFSTQNKLGEGGFGPVYKGTLIDGQELAVKRLSKESGQGLEEFKNEVALIAKLQHRNLVKLLGCCIEGEEKMLIYEYMPNKSLDFFVFGSSPYDLF 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00745 579 SUPERFAMILY Protein kinase-like (PK-like) 464 574 IPR011009 -
Pumo11g00745 579 ProSiteProfiles Bulb-type lectin domain profile. 8 131 IPR001480 -
Pumo11g00745 579 CDD B_lectin 14 137 IPR001480 -
Pumo11g00745 579 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 8 570 - -
Pumo11g00745 579 Pfam PAN-like domain 325 393 IPR003609 -
Pumo11g00745 579 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 3 134 - -
Pumo11g00745 579 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 324 407 - -
Pumo11g00745 579 Pfam S-locus glycoprotein domain 196 304 IPR000858 GO:0048544
Pumo11g00745 579 ProSiteProfiles EGF-like domain profile. 269 306 IPR000742 -
Pumo11g00745 579 Gene3D Phosphorylase Kinase; domain 1 458 560 - -
Pumo11g00745 579 Gene3D Hepatocyte Growth Factor 325 404 - -
Pumo11g00745 579 Gene3D - 3 134 IPR036426 -
Pumo11g00745 579 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 450 560 - -
Pumo11g00745 579 Pfam D-mannose binding lectin 56 163 IPR001480 -
Pumo11g00745 579 CDD PAN_AP_plant 322 408 - -
Pumo11g00745 579 Pfam Protein tyrosine and serine/threonine kinase 487 569 IPR001245 GO:0004672|GO:0006468
Pumo11g00745 579 SMART blect_4 14 137 IPR001480 -
Pumo11g00745 579 ProSiteProfiles Protein kinase domain profile. 485 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g00745 579 SUPERFAMILY alpha-D-mannose-specific plant lectins 57 168 IPR036426 -
Pumo11g00745 579 ProSiteProfiles PAN/Apple domain profile. 325 408 IPR003609 -
Pumo11g00745 579 SMART ntp_6 328 407 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00745 Pumo-Chr11 25176659 25179834 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00745 426 571 Receptor kinase-like Gene Family AT4G23190 50.000 1.71e-37 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo11g00745 S_locus_glycop 3.7e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00745 - - gmx:100815430 947.577