Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00742 ATGGCAGCAACACTAATGGCAGCCTCAGCAAGCACTGGCACTGTCCTTAAACCAACCCCTTTCCTTGGCCAAAGTAGGGGAACCAATGCCAACCCTCTTAGAGATGTTGTCTCCATGGGAGCTGGCAAATACACCATGGGAAATGAATTGTGGTATGGACCAGACAGAGTGAAATACTTGGGACCCTTTTCAGCTCAGACCCCTTCATACCTGACTGGAGAATTCCCAGGGGACTATGGATGGGACACTGCTGGTTTGTCTGCTGACCCTGAAGCATTTGCCAAGAACAGGGCTCTTGAGGTGATCCATGGACGTTGGGCTATGCTTGGAGCACTAGGATGCATCACCCCAGAAGTGCTTGAGAAGTGGGTGAGAGTGGACTTCAAGGAGCCAGTTTGGTTCAAAGCAGGAGCTCAGATATTCTCAGAAGGTGGCCTAGACTACTTGGGGAACCCCAACCTTGTGCATGCACAAAGCATCTTGGCAGTGCTAGGCTTCCAAGTTGTTCTGATGGGTCTTGTTGAGGGATTCCGCATCAACGGCCTTCCCGGCGTGGGAGAGGGCAATGACCTCTACCCTGGTGGCCAGTACTTTGACCCTCTTGGCCTTGCTGATGATCCTGTCAACTTTGCTGAGCTCAAGGTTAAGGAGATCAAGAATGGAAGGTTGGCCATGTTCTCCATGTTCGGCTTCTTTGTCCAAGCCATTGTGACTGGGAAAGGACCACTTGAGAACCTCTTGGATCACCTTGACAACCCTGTGGCCAACAATGCTTGGGTCTATGCCACCAAGTTTGTGCCTGGATCTTAA 810 0.5123 MAATLMAASASTGTVLKPTPFLGQSRGTNANPLRDVVSMGAGKYTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNDLYPGGQYFDPLGLADDPVNFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFVPGS 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00742 269 Gene3D Chlorophyll a/b binding protein domain 58 262 - -
Pumo11g00742 269 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 17 268 IPR001344 GO:0009765|GO:0016020
Pumo11g00742 269 FunFam Chlorophyll a-b binding protein, chloroplastic 58 262 - -
Pumo11g00742 269 Pfam Chlorophyll A-B binding protein 68 235 IPR022796 -
Pumo11g00742 269 SUPERFAMILY Chlorophyll a-b binding protein 50 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00742 Pumo-Chr11 25135465 25137433 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00742 1 268 Chloroplast and Mitochondria Gene Families AT2G05070 67.870 2.29e-123 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00742 K08914 - cave:132175650 534.258