Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00738 ATGGTGTTATCGGCTTCGCCATGTTCCTTGGCGAGAAGCTCGCTAGAGGAGATGCTGGATTCCCTTCGCCGGAGGGACGAGGAGGAGGAGAAGAAGAAGGACTCGCCGCCGGCGTTGCCCGCGAGGCCGGCCTCGCGGGCACGGCTTCCTCCGGCGCGGCGGTCGCTGCCGAACAACTTTAAGGTCGCGCCGGAGAATGGAGTTGGGACTAATGGGGAGAGTGAGGTGAAGGAGAATGATTTGGGGCAGAAAAGGAGAAGGAATAGTTTTGGGAGCAAGAGGGTGAAGAAGGATGTGGAGTCTCCTTATGCGGCACTTTCTTCCAGTGATTCATCAGGGATGGTTTGGGAATTGGAGAGTGATGATAGCATTTCTTATTTCATCAAAAAGAAGCTTCGTGTTTGGTGTAGGCAACCAAGAGGGCAGTGGGAACTAGGAACAATACAGTCAACTTCAGGAGAGGAAGCATCCATTTCACTCTCAAATGGAAATGTTATGAAAGTGGTCAGATCAGAGATTCTACCAGCTAATCCTGTTGTTTTGGAGGGTGTGGAAGATCTTATTAAACTTGGTTATTTGAACGAGCCATCGGTTCTTCACAATCTGAAGTTGAGATATTCTCAAGGAATGATTTATAGTAAAGCAGGGCCAATTTTAATTGCCCTCAATCCTTTCAAAGATCTTCAGACAGATGGAAATGATTATGTCTCAGCTTATAGGCAGAGAACTATTGATAGTTCTCATGTTTATGCTGTGGCAGATGCGGCTTATAACAAGATGATAAGAGATGAAGTAAATCAGTCCATTATCATAAGTGGTGAGAGTGGATCTGGGAAGACAGAAACAGCTAAAATTGCATTGCAATACTTAGCTGCTCTTGGTGGTGGTGGCAGTTGTGTGATAGAAAATGAATTTCTTCAGATAAATCGTATACTAGAAGCTTTTGGGAATGCAAAAACATCTAGGAATAACAACTCTAGCAGATTTGGGAAGTTGATTGAAATTCATTTCAGCTCCATGGGTAAAATATGTGGGGCTAAAATTCAAACCTTATTGTTGGAAAAGTCCAGAGTTGTTCAACTGGCCAATGGTGAGAGATCGTATCACGTATTTTATCAACTTTGTGCTGGATCTTCATCTGATCTTAAAGAGAGACTGAATCTTAGAGCAGTCAGTGAATATAAATATCTAGTTCAGAGTGACTGCACGTCAATTGATGGTGTCGATGATGCTAAAAACTTTCATCAGCTGATGAAAGCACTGGATACTGTTCAAATTTGTAAAGAGGATCAAGAGATGATCTTTAAGATGCTTGCTGCAATACTATGGCTGGGAAATATATCATTCCAAGTAGACAGTGAAAATCACATTGAGGTTGTTGATGATGAAGCTGTAACCAGTACTGCCCAGCTGATGGGTTGCAGTTCCCAGGAATTAATGACAGCATTATGTACCCATAAAATTCAATCTGATGAGGATACTATTGCCAAAAATTTGACATTGAGGCAGGCAATTGAAAGAAGAGATGCAATTGCAAAATTCATCTATGCAAGCTTGTTTGACTGGCTTGTAGAACAAGTTAACAAGTCACTTGAAGTGGGTAAACGACATACTGGGAAATCCATAAGTATCCTTGATATTTATGGGTTTCAGACTTTCCAGAAAAATAGCTTTGAGCAGTTTTATATAAATTATGCCAATGAGAGGATTCAACAACATTTTAATCGGCATCTGTTTAAACTTGAGCAGGAGGACTATGAATTGGATGGCATTGATTGGACTAAGGTAGATTTTGAGGATAATGAAGAGTGCTTGGATCTATTTGAGAAGAAACCTCATGGTCTACTCTCTTTATTGGATGAGGAGTCAAATTTAGCCAAGGCTTCTGATTTAACATTTGCCAACAAGCTTAAGCACCACCTGGATGCTAATCCTTGCTTCAAAGGAGAAAGAGGCAGAGCTTTCTGTGTTCGTCACTATGCAGGGGAGGTTCTGTACGATACAAATGACTTTCTAGAAAAGAACAGAGACATGTTGTCTTCTGATTCCATTCAATTCCTGTCATCATGTAATTGTGAACTGCTGCAGTTGTTCTCCAAAATGTTTAACCAGTCTCAAAAGCAGAGTGTTGCAACAAAGTTCAAGGTTCAATTGTTCAAGTTGATGCATCAGTTGGAGAGCACCACGCCTCACTTTATTCGTTGCATAAAGCCAAATACTAAGCAGCTTCCTGGCATTTTTGATGAAGGCCTTGTCCTACAACAGCTCAGGTGTTGTGGAGTTCTAGAAGTTGTTAGACTTTCAAGGGCTGGATATCCTACTCGAATGGCCCATCAAGAGTTTTCCAGAAGGTTTGGGTTTATGCTTTCTGAGGCCAACATATCGCAGGATCCATTAAGCATCTCAGTTGCTGTTATGCAAAAATTTAATATCCCTTCGGAAATGTACCATGTTGGCTACACCAAATTGTATCTTCGAGCTGGGCAGATTGATGCCCTGCAGAATAAGAGAAAACAGATTTTGCAGGGAATACTTGGGATTCAAAAATGCTTCCGTGGTCATCAAGCTCGTGGTTATTTCTGTGAACTTAAGAATGGAGTGACAACATTACAATCATTTATTCGTGGAGAAAATACAAGAAGGAAATATGGTGTTACGGTGAAGTCTTCAATAACAATTTATTCTAGAAAACTGGAGGAGATCCATGCAATCATACTATTACAATCTGTAATTCGTGGTTGGCTGGTTAGAAGGGATGCTAGTCACGTAAATAGGTTGAAGAGATATCCTGAAAATGCTAAACCTAGGCGGAAGTCCTTTATGAAGATAATACCAGAGGACTTGTCCAAAGAGCCGGTTCAGAATCTGCTTTCAGCTTTAGCAGAACTCCAAAGGCAGGTTGACAAGGCCGATGCAATTGTGGAGCAAAAGGAAGATGAAAATACTGAATTGAGGGAACAGCTAAAACAATCTGAGAGGAAGAGGATTGAATATGAGACAAAAATGAAATCAATGGAGGAGGCTTGGCAAAAACAGATGGCATCTTTGCAAATGAGTCTTGTTGCTGCTAGAAAGAGCCTTGCTCCTGAGAATGCTACCGTTCAACCTGTGAGACGTGATTTCGTGGTGCCTCGTGGTTATGATTCTGAAGATACTACTTCCATGGGATCTCGAACACCTGGTGGGAGCACACCAATGCTTTCTGGTAGTCTATCTGTCACTGATGCAGGGAGACAGGTCAATGGTACTTTGACCACAGTCGGCAATCTGATGAAGGAATTCGAGCAGCGAAGACAGAACTTTGATGATGAAGTAAAAACTTTGAGTGAGGTTAAACTGGAGCAGTCTGCCAGCACGAATTCCTTCGAAGAGCTTCGGAAACTTAAACAAAGATTTGAGGGATGGAAGAAACAGTACAAGGTTAGATTACGCGATGCTAAAACAAGGCTTTATAAATCAGAAACGGAAAAAGGTCGGCGAACATGGTGGGGGAAGTTTAGCTCAAAAGCATAA 3513 0.4176 MVLSASPCSLARSSLEEMLDSLRRRDEEEEKKKDSPPALPARPASRARLPPARRSLPNNFKVAPENGVGTNGESEVKENDLGQKRRRNSFGSKRVKKDVESPYAALSSSDSSGMVWELESDDSISYFIKKKLRVWCRQPRGQWELGTIQSTSGEEASISLSNGNVMKVVRSEILPANPVVLEGVEDLIKLGYLNEPSVLHNLKLRYSQGMIYSKAGPILIALNPFKDLQTDGNDYVSAYRQRTIDSSHVYAVADAAYNKMIRDEVNQSIIISGESGSGKTETAKIALQYLAALGGGGSCVIENEFLQINRILEAFGNAKTSRNNNSSRFGKLIEIHFSSMGKICGAKIQTLLLEKSRVVQLANGERSYHVFYQLCAGSSSDLKERLNLRAVSEYKYLVQSDCTSIDGVDDAKNFHQLMKALDTVQICKEDQEMIFKMLAAILWLGNISFQVDSENHIEVVDDEAVTSTAQLMGCSSQELMTALCTHKIQSDEDTIAKNLTLRQAIERRDAIAKFIYASLFDWLVEQVNKSLEVGKRHTGKSISILDIYGFQTFQKNSFEQFYINYANERIQQHFNRHLFKLEQEDYELDGIDWTKVDFEDNEECLDLFEKKPHGLLSLLDEESNLAKASDLTFANKLKHHLDANPCFKGERGRAFCVRHYAGEVLYDTNDFLEKNRDMLSSDSIQFLSSCNCELLQLFSKMFNQSQKQSVATKFKVQLFKLMHQLESTTPHFIRCIKPNTKQLPGIFDEGLVLQQLRCCGVLEVVRLSRAGYPTRMAHQEFSRRFGFMLSEANISQDPLSISVAVMQKFNIPSEMYHVGYTKLYLRAGQIDALQNKRKQILQGILGIQKCFRGHQARGYFCELKNGVTTLQSFIRGENTRRKYGVTVKSSITIYSRKLEEIHAIILLQSVIRGWLVRRDASHVNRLKRYPENAKPRRKSFMKIIPEDLSKEPVQNLLSALAELQRQVDKADAIVEQKEDENTELREQLKQSERKRIEYETKMKSMEEAWQKQMASLQMSLVAARKSLAPENATVQPVRRDFVVPRGYDSEDTTSMGSRTPGGSTPMLSGSLSVTDAGRQVNGTLTTVGNLMKEFEQRRQNFDDEVKTLSEVKLEQSASTNSFEELRKLKQRFEGWKKQYKVRLRDAKTRLYKSETEKGRRTWWGKFSSKA 1170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00738 1170 SMART MYSc_2a 176 839 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo11g00738 1170 ProSiteProfiles IQ motif profile. 842 869 IPR000048 GO:0005515
Pumo11g00738 1170 FunFam Myosin heavy chain 366 422 - -
Pumo11g00738 1170 Coils Coil 1091 1111 - -
Pumo11g00738 1170 PRINTS Myosin heavy chain signature 266 291 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo11g00738 1170 PRINTS Myosin heavy chain signature 310 337 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo11g00738 1170 PRINTS Myosin heavy chain signature 541 569 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo11g00738 1170 PRINTS Myosin heavy chain signature 212 231 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo11g00738 1170 PRINTS Myosin heavy chain signature 594 622 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo11g00738 1170 ProSiteProfiles IQ motif profile. 900 928 IPR000048 GO:0005515
Pumo11g00738 1170 Pfam Myosin head (motor domain) 184 826 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo11g00738 1170 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 129 178 IPR004009 GO:0003774|GO:0005524|GO:0016459
Pumo11g00738 1170 Gene3D - 553 728 - -
Pumo11g00738 1170 Gene3D - 772 839 - -
Pumo11g00738 1170 Gene3D Kinesin motor domain 182 771 IPR036961 -
Pumo11g00738 1170 Pfam IQ calmodulin-binding motif 867 883 IPR000048 GO:0005515
Pumo11g00738 1170 Pfam IQ calmodulin-binding motif 902 918 IPR000048 GO:0005515
Pumo11g00738 1170 Coils Coil 953 1008 - -
Pumo11g00738 1170 Gene3D - 844 888 - -
Pumo11g00738 1170 ProSiteProfiles Myosin motor domain profile. 182 838 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo11g00738 1170 MobiDBLite consensus disorder prediction 1050 1065 - -
Pumo11g00738 1170 MobiDBLite consensus disorder prediction 14 94 - -
Pumo11g00738 1170 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 134 920 IPR027417 -
Pumo11g00738 1170 Coils Coil 12 32 - -
Pumo11g00738 1170 ProSiteProfiles IQ motif profile. 863 892 IPR000048 GO:0005515
Pumo11g00738 1170 MobiDBLite consensus disorder prediction 17 37 - -
Pumo11g00738 1170 SMART iq_5 862 884 IPR000048 GO:0005515
Pumo11g00738 1170 SMART iq_5 899 921 IPR000048 GO:0005515
Pumo11g00738 1170 SMART iq_5 839 861 IPR000048 GO:0005515
Pumo11g00738 1170 Gene3D Myosin VI head, motor domain, U50 subdomain 423 530 - -
Pumo11g00738 1170 MobiDBLite consensus disorder prediction 1046 1065 - -
Pumo11g00738 1170 Gene3D - 366 422 - -
Pumo11g00738 1170 PANTHER MYOSIN 177 1164 - -
Pumo11g00738 1170 MobiDBLite consensus disorder prediction 77 94 - -
Pumo11g00738 1170 CDD MYSc_Myo8 196 826 IPR036022 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00738 Pumo-Chr11 25105423 25117024 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00738 1 1165 Myosins gene family AT5G54280 59.576 0.0 1431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00738 K10357 - gmx:100802074 2058.88