Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00719 ATGGAACTCTCTTACCATGACAAAAAATTCAACAATTTCACAGAAGAGTGGTACTGCAAGCTGCATTTCTTTAGCTTCATCAAACTTGGACGATTCTTCAGTTTCCAAGAAATCCTAGATGCTACCAACAAATTGATGAGAGCTACTTCTTGCGTCGGTGGTTTCGGAAGGGTTTATAAGGGACGCTTGAGATGGGACAATGTGGCTGTTAAAAGGGGTAACCCGAGATCACAAGGCCTTGCTGAATTCCGGACAGAAATTGAAATGTTGTCCAAGCTTCGCCACCGCCATCTTGTGTCTCTCATTGGTTATTGTGATGAGAGTCAGAAATGA 333 0.4294 MELSYHDKKFNNFTEEWYCKLHFFSFIKLGRFFSFQEILDATNKLMRATSCVGGFGRVYKGRLRWDNVAVKRGNPRSQGLAEFRTEIEMLSKLRHRHLVSLIGYCDESQK 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00719 110 PANTHER OS07G0166700 PROTEIN 31 109 IPR045272 GO:0004714|GO:0006468
Pumo11g00719 110 FunFam receptor-like protein kinase FERONIA 8 110 - -
Pumo11g00719 110 Pfam Protein tyrosine and serine/threonine kinase 53 109 IPR001245 GO:0004672|GO:0006468
Pumo11g00719 110 Gene3D Phosphorylase Kinase; domain 1 7 110 - -
Pumo11g00719 110 SUPERFAMILY Protein kinase-like (PK-like) 52 109 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00719 Pumo-Chr11 24865415 24865747 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00719 35 110 Receptor kinase-like Gene Family AT3G46290 65.823 1.27e-26 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pumo11g00719 PK_Tyr_Ser-Thr 4.5e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00719 - - nnu:104612589 120.168