Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00714 ATGCACGAGGAAATGGGTCAGGGAATTGTTCATCAAGAATCTATCGAATACCCTGGAAGACAAAGTCGATTGTGGAGACCGTATGAAGTACAAGATGTATTGAAATATAACAGGGGAACTGATGTTGTTGAAGGTGTAATCTTGGGTTTGTCAACATTAACCGGGGATCTATATTTGAGCTCCATTTCCTTTGCAAAAATGACTTGCGGGAGATTTCTTCTAATCTATGGTTGGTATGGGATTAACAGATTTGTTTTGTACATCTCAAATGGTCTTGAGTCGTTGTCTGATAAATTGATGTACCTCCAATGGGATGGATTCTCGCTTGAGTCTTTGCCTTTGCCGTCTAACTTTTGTGCTCAACATCTTGTAGAGCTTCACATGACTCATAGCAAGCTTAAAAAGCTTTGGGACGGAGTACAGAATCTTGTAAATTTAAAGACAATTGACCTTTCATACTCCCAATACCTGATAGAGACCCCAGACTTATCTAAGGCAGAAAAACTTGAAAGTGTTTCTCTTTGTTGGTGTGAAAGCTTGAGTCAGCTCCATGTTCATGTAAAATCTCTCCGTGTACTGAACCTGAACGGTTGTTCATCTCTCAAAGAATTCTCAGTTAGATCGGAGGAAATGACTACATTGGACTTATCAGACACTGCTATACGTTCCTTGCCATCATCAATTGGTCACTTATTGTCTTTAAAAGAATTACACCTTAGTGGGACTAATGTTGAGAGCTTGCCTGCAAACATGAAAAACCTTTCAATGCTGACCAGGCTTTGGTTAGATGATTGCAGGAAACTCATGTCTCTGCCAGAACTTCCACCACCTCTGAGAGTGCTTAATTTAAAAGATTGCAGGAAACTCGTGTCTCTGCCGGAGCTTCCACCATCCCTGGAAAAGGTGAGGGCCTATAACTGCATTTCTCTGGAGACAGACATCACTCAACGGCTAGTGTTACAACACATGTTACAGAGCCACATACCCTACTTACACCAACATGTCAATGACGATTATGACAATGAGGATCCTGAGTATTTTTACACTAGGTACTTCATGTTCCCAGGAGACCATCTCACTGACAAGTGTGGGTTTCGCACAGCAGAGAGTTCAATCACTATTCCTTATCTTCCAAAATCTCACTTGCATGGTTTCATTTATTGCATTGTTATTTCTAAGAGATCATCCTTTGATGTTTTTTCATGTTGTATCTATCAAAATGGCATATGGGTTGGCCGTGACGGGAAGGATATGCGTGACCGAAAATTAATTTCAGATCATGTGGTATTTTGGTATCATGCAATCAGCAAATTTGACAGAGTTACACACAATAAAGAGAGGATAAAAGGGTGTGGGGTCTTCCCAGTATATGCCTCAGAATCGGGGTTGATGTTTGGTACTGGTAGCAAGGGAATTTTTGAATTGGAATCCATTACTCAAATCTCTGATATGAGTCACAGCCTAAAGCAATTGAAGTTGGAGGCTCTAAAAATGAAAATGAAGTTGATTGGGAACAACTTCAGAGGAGGACCTTGCCATAAATGA 1545 0.4052 MHEEMGQGIVHQESIEYPGRQSRLWRPYEVQDVLKYNRGTDVVEGVILGLSTLTGDLYLSSISFAKMTCGRFLLIYGWYGINRFVLYISNGLESLSDKLMYLQWDGFSLESLPLPSNFCAQHLVELHMTHSKLKKLWDGVQNLVNLKTIDLSYSQYLIETPDLSKAEKLESVSLCWCESLSQLHVHVKSLRVLNLNGCSSLKEFSVRSEEMTTLDLSDTAIRSLPSSIGHLLSLKELHLSGTNVESLPANMKNLSMLTRLWLDDCRKLMSLPELPPPLRVLNLKDCRKLVSLPELPPSLEKVRAYNCISLETDITQRLVLQHMLQSHIPYLHQHVNDDYDNEDPEYFYTRYFMFPGDHLTDKCGFRTAESSITIPYLPKSHLHGFIYCIVISKRSSFDVFSCCIYQNGIWVGRDGKDMRDRKLISDHVVFWYHAISKFDRVTHNKERIKGCGVFPVYASESGLMFGTGSKGIFELESITQISDMSHSLKQLKLEALKMKMKLIGNNFRGGPCHK 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00714 514 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 3 303 IPR044974 GO:0006952
Pumo11g00714 514 Gene3D Ribonuclease Inhibitor 33 186 IPR032675 -
Pumo11g00714 514 Gene3D Ribonuclease Inhibitor 187 327 IPR032675 -
Pumo11g00714 514 Pfam Leucine Rich Repeat 122 141 IPR011713 -
Pumo11g00714 514 SUPERFAMILY L domain-like 56 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00714 Pumo-Chr11 24636402 24638839 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00714 3 312 WRKY Transcription Factor Family AT5G45050 31.452 5.99e-33 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00714 - - gmx:100793798 477.633