Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00713 ATGGCGAACGATAAAGGAGAATCGGTTACGAAAACGAGGGATCTTCAAGTTCTTCGCGAGGGCACAAGGAAGACCGTGTTTGCCAATTTCATGGATGTGTGCGAATCGATGCACCGGGAGGCAGAGCACGTGATGGCTTTCTTGCTTGCCGGATTGCGTACGAGTGGCTCCCTTGATGAACGGCAGAGACTGGTTGTGGATGGAAGGTATGCACCAAAAAACTTTGATGGAGTTCTGCAACGATATGTGGATGAATATGTCATTTGTCATGCTTGCAAGAGTTTCGATACTCTGCTTTTCATGGAGAATGGTGTCTTCTGTTTCCGCTGTGTCAAGTGGGGAGTGGGAAGACCAGTTGCTCCTGTTGGCCCAAGCAACACGGGAGGGACATGA 393 0.4962 MANDKGESVTKTRDLQVLREGTRKTVFANFMDVCESMHREAEHVMAFLLAGLRTSGSLDERQRLVVDGRYAPKNFDGVLQRYVDEYVICHACKSFDTLLFMENGVFCFRCVKWGVGRPVAPVGPSNTGGT 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00713 130 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 15 122 IPR045196 GO:0003743|GO:0006413
Pumo11g00713 130 SMART eIF2Bneu4 7 116 IPR002735 GO:0003743|GO:0006413
Pumo11g00713 130 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 9 89 IPR016189 GO:0003743|GO:0006413
Pumo11g00713 130 Gene3D - 1 122 - -
Pumo11g00713 130 Pfam Domain found in IF2B/IF5 8 111 IPR002735 GO:0003743|GO:0006413
Pumo11g00713 130 FunFam Eukaryotic translation initiation factor 2 subunit 1 122 - -
Pumo11g00713 130 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 86 120 IPR016190 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00713 Pumo-Chr11 24577926 24578348 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00713 1 122 Eukaryotic Initiation Factors Gene Family AT5G20920 59.836 2.71e-47 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00713 K03238 - twl:120006500 159.073