Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00707 ATGGAGCAGGAGATGGAAGACATAGAGTCTCAAACTTCGTACAAAGCAACAGTGCAGGAGGAAGCACCTGACATCTTTCACAAGAGAAATCCTGCAGTAACTCTCAAGTTCCATGATGTTATCTATAAAATTAAGACCACAAAGTGGGGATTTCTTAAGAACACAAAGGCAGAAGAGAAAGTAATACTGAATGGAGTGACAGGCATGGCTCAACCTGGTGAAATTCTTGCCATGTTAGGTCCATCTGGAAGTGGCAAAACAACTTTGCTAGCAGCATTGGGAGGCCGGCTTGGAGGGAAACTCCATGGAAGCATAACATACAATGGCAAAGCCTTCTCAAATGCAATGAAGAGGAAAACCAGTTTTGTCACACAAGATGATGTTCTCTATCCCCACTTGACTGTGATTGAAACTCTAGTGTTCACTGCCCTTCTCAGATTGCCAAACAGTTTCACTACAAAGGAGAAAATTGTGCATGCAAAAGCTGTGATGGCTCAACTTGGTTTAACCAAGTGCAAAGATAGCATCATTGGAGGGCCACTTCTGAGAGGGATTTCTGGGGGGGAGAGGAAAAGGGTTAGCATTGGACAAGAAGTGCTCATAAACCCAAGCTTGTTGTTCCTGGATGAGCCAACCTCTGGCTTAGACTCAACAACAGCTAAAAGAATTGTCTCAACTTTGAGGGAGCTAGCAAATGGAGGGAGAACTGTTGTGATGACCATACATCAACCTTCAAGTAGGATGTACTGCATGTTTCACAGGGTGTTACTGCTTTCAGAAGGGAACCTTGTGTATTTTGGAAAAGGGTCTGAAGCTATGGAGTATTTTTCTAGTATTGGATATGCCCCTACCATGGCCACGAACCCCTCAGACTTGCTTTTGGATCTTGCAAATGGTGTCTACAATGATCAATCGAATGAGGACCATGCCTTAAATAAGCGTAAGTTGATTTCTGCATATAGGAACTACTTCGATGCCAAATTGAAGCCAGTGCTTCATGAAATAACTGACTATGATAAAAGTAAGGGTAGAATTGAAGACAATGGCTTTGGGGAATGGCCTACCAGTTGGTCACAACAATTCCTTGTGCTGCTAAAAAGAGATATGAAAGAGAGAAACTTCTGGGGTAGCATGCCTCTCTACCAAGCAATATTCATCTTCCCCCAAGAGCTAATGATGCTGAAGAAGGAACGATCCTCTGGAATGTACAGGCTCTCCTCATATTTCATGTCAAGGATGGTTGGTGACCTTCCAATGGAGCTTGTGCTTCCCACCATATTTCTTACCATAGTCTATTGGATGGCAGGGCTGAAAGCTAGTGTGGTAAACTTCATATACACACTGCTCAGTGTCTTTCTCAATGTGCTAGTTTCACAAGGGCTAGGCCTTGCCATTGGTGCCATTGTAATGGATCAGAAATCCGCAACCACACTGGCCTCAGTGATCGTGCTAACTTCCATTCTGTATGGCACTAGTGACACATACCCTTGTTCTAAGGGCCAGTGTTTGATTGCAGAACATCCTGTGATTAAGCAAATGGGGCTACATTTGCAAGGGAAAATCATGGCTGCATTGGCTCTCTTCACAATGCTAATAGGCTACAGGCTTGTGGCTTATTTTGCTCTGATGAGGATTGGGGTGACAAAGAAATTGGCATAG 1659 0.4376 MEQEMEDIESQTSYKATVQEEAPDIFHKRNPAVTLKFHDVIYKIKTTKWGFLKNTKAEEKVILNGVTGMAQPGEILAMLGPSGSGKTTLLAALGGRLGGKLHGSITYNGKAFSNAMKRKTSFVTQDDVLYPHLTVIETLVFTALLRLPNSFTTKEKIVHAKAVMAQLGLTKCKDSIIGGPLLRGISGGERKRVSIGQEVLINPSLLFLDEPTSGLDSTTAKRIVSTLRELANGGRTVVMTIHQPSSRMYCMFHRVLLLSEGNLVYFGKGSEAMEYFSSIGYAPTMATNPSDLLLDLANGVYNDQSNEDHALNKRKLISAYRNYFDAKLKPVLHEITDYDKSKGRIEDNGFGEWPTSWSQQFLVLLKRDMKERNFWGSMPLYQAIFIFPQELMMLKKERSSGMYRLSSYFMSRMVGDLPMELVLPTIFLTIVYWMAGLKASVVNFIYTLLSVFLNVLVSQGLGLAIGAIVMDQKSATTLASVIVLTSILYGTSDTYPCSKGQCLIAEHPVIKQMGLHLQGKIMAALALFTMLIGYRLVAYFALMRIGVTKKLA 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00707 552 Pfam ABC-2 type transporter 375 490 IPR013525 GO:0016020|GO:0140359
Pumo11g00707 552 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 35 285 IPR003439 GO:0005524
Pumo11g00707 552 ProSitePatterns ABC transporters family signature. 185 199 IPR017871 GO:0005524|GO:0016887
Pumo11g00707 552 Pfam ABC-2 type transporter 242 312 IPR043926 GO:0140359
Pumo11g00707 552 Gene3D - 52 280 IPR027417 -
Pumo11g00707 552 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 20 372 - -
Pumo11g00707 552 Pfam ABC transporter 63 213 IPR003439 GO:0005524
Pumo11g00707 552 SMART AAA_5 72 262 IPR003593 GO:0016887
Pumo11g00707 552 FunFam ABC transporter G family member 22 51 279 - -
Pumo11g00707 552 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 58 279 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00707 Pumo-Chr11 24469595 24473562 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00707 70 274 Calmodulin-binding Proteins AT2G36910 23.721 1.65e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00707 K05681 - gmx:100812397 915.99