Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00692 ATGGGGCCTCTTGTGATTTCTTCAAGTTTTCTTTGGTATCTTTGCTTTGTTCTAAGTGCATTTAGAGTAGTCCACGTCCAAGCTAATAACGGTTGGCTTAACGCTCATGCAACGTTCTATGGGGCCAATCAAAATCCCACCACCCTTGGGGGAGCATGTGGCTATGATGACACGTTTCATGCAGGGTTTGGTGTGAACACCGCAGCGGTGAGCACCATGCTGTTCAGAGACGGTGAGGTTTGTGGTGCATGCTACCAAGTAATGTGTGACTATAGGGCAGACCCAAAATGGTGCCTTATTAGCCGCAGTGTGACGGTAACCGCCACTAATTTTTGCCCTCCAAACAACCACTGGAGGGTGGTGTGA 366 0.4891 MGPLVISSSFLWYLCFVLSAFRVVHVQANNGWLNAHATFYGANQNPTTLGGACGYDDTFHAGFGVNTAAVSTMLFRDGEVCGACYQVMCDYRADPKWCLISRSVTVTATNFCPPNNHWRVV 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00692 121 PANTHER EXPANSIN-A15 15 116 IPR002963 GO:0009664
Pumo11g00692 121 PRINTS Expansin/Lol pI family signature 49 67 IPR007118 GO:0005576
Pumo11g00692 121 PRINTS Expansin/Lol pI family signature 31 46 IPR007118 GO:0005576
Pumo11g00692 121 PRINTS Expansin/Lol pI family signature 71 89 IPR007118 GO:0005576
Pumo11g00692 121 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 50 121 IPR007112 -
Pumo11g00692 121 Gene3D - 18 120 IPR036908 -
Pumo11g00692 121 PRINTS Expansin signature 104 114 IPR002963 GO:0009664
Pumo11g00692 121 PRINTS Expansin signature 62 76 IPR002963 GO:0009664
Pumo11g00692 121 PRINTS Expansin signature 91 102 IPR002963 GO:0009664
Pumo11g00692 121 SMART dpbb_1 67 121 IPR007112 -
Pumo11g00692 121 Pfam Lytic transglycolase 67 115 IPR009009 -
Pumo11g00692 121 SUPERFAMILY Barwin-like endoglucanases 16 117 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00692 Pumo-Chr11 24226918 24228239 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00692 29 117 Expansin Gene Family AT3G15370 50.420 4.76e-35 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00692 - - gmx:106795376 249.21