Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00685 ATGTGCATATTATGTTGTCATCTCAAGGTTTATATACTGTTATTTTCCAACCTATCAGGGGCTGCGAGAAAATTTTACAAGCATGACAAAAACAAACGGAGAATAGAAGATATTGATTTGCCAACATTCGATTTATCTGTCATAGCTAAAGCCACTGAAAACTTTTCAACCAAAAATAAGCTTGGAGAAGGTGGATTTGGACCAGTATACAAGGGCACACTGATAGATGGGAAAGTGTTAGCTGTGAAAAGGCTTTCAAAGAAGTCAGGACAAGGGTTGGATGAGTTCAAAAATGAAGTGGGACTGATCGCCAAACTTCAACACCGTAATCTTGTAAAGCTTCTAGGTTGCTGCATAGAAGGAGAAGAAAAAATGTTGATCTATGAATACATGCCAAATCAAAGCTTGGACTACTTTGTTTTTGATGAAACCAAAAGGAAGTTGCTGGATTGGCATAAGCGTTTCAGTATTATTAGTGGCATTGCTCGAGGACTTCTTTATCTGCATCAAGACTCTAGGCTAAGGATAATTCACAGAGATCTAAAAACTAGCAATATTTTACTAGACGCCAATTTGGATCCCAAAATATCAGACTTTGGTCTGGCTCGATCATTTTTGGGAGATCAAGTTGAGGCAAACACAAATAGGGTGGCTGGAACATATGGTTACATGCCTCCTGAGTACGCTGTGCGTGGGCACTTCTCAGTGAAATCAGATGTCTGTAGTTATGGAGTGATTGTACTAGAAATTGTAAGTGGGAAGCAAAACAGGGAATTTGCAGACCCTGAAAACTACGATAATCTTCTTGGACATCAAAAACCTCAAGATAGACCAGACGTGTCATCAGTGGTTTTAATGTTGAATGGTGATGATAAATTATTGCCACAGCCAAAGGTTCCTGGCTTTTACACTGAAAATGATGTTACATTTGAAATTGAAGCAAATCACAACTTGTGCACAGTTAATGAACTTTCCATCACAATGTTAAATGCAAGATAG 999 0.3844 MCILCCHLKVYILLFSNLSGAARKFYKHDKNKRRIEDIDLPTFDLSVIAKATENFSTKNKLGEGGFGPVYKGTLIDGKVLAVKRLSKKSGQGLDEFKNEVGLIAKLQHRNLVKLLGCCIEGEEKMLIYEYMPNQSLDYFVFDETKRKLLDWHKRFSIISGIARGLLYLHQDSRLRIIHRDLKTSNILLDANLDPKISDFGLARSFLGDQVEANTNRVAGTYGYMPPEYAVRGHFSVKSDVCSYGVIVLEIVSGKQNREFADPENYDNLLGHQKPQDRPDVSSVVLMLNGDDKLLPQPKVPGFYTENDVTFEIEANHNLCTVNELSITMLNAR 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00685 332 Pfam Domain of unknown function (DUF3403) 294 332 IPR021820 GO:0004674
Pumo11g00685 332 ProSiteProfiles Protein kinase domain profile. 55 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g00685 332 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 4 271 - -
Pumo11g00685 332 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 130 - -
Pumo11g00685 332 SUPERFAMILY Protein kinase-like (PK-like) 40 300 IPR011009 -
Pumo11g00685 332 Gene3D Phosphorylase Kinase; domain 1 17 130 - -
Pumo11g00685 332 SMART serkin_6 55 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g00685 332 ProSitePatterns Serine/Threonine protein kinases active-site signature. 176 188 IPR008271 GO:0004672|GO:0006468
Pumo11g00685 332 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 131 222 - -
Pumo11g00685 332 Pfam Protein tyrosine and serine/threonine kinase 57 278 IPR001245 GO:0004672|GO:0006468
Pumo11g00685 332 Gene3D Transferase(Phosphotransferase) domain 1 131 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00685 Pumo-Chr11 24139962 24141437 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00685 23 303 Receptor kinase-like Gene Family AT4G23190 51.385 3.97e-108 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo11g00685 PK_Tyr_Ser-Thr 6.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00685 - - gmx:100819141 528.48