Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00672 ATGGGTGGTGTATGTTGCAAGCCCTCTGCCATTGAGGATAGCAAGGAGAGTCCAAGGGAGCGTTTGTCGAGCAAGGCAGCTTCGTTGGACTCTCGTGTGTCGAGGGGTGCTTCGTCGAGGAGGGAGGAAGCATATAGGGTGAAGGATAGGTATGATGGTAATGATGTGAGGACTGCTTTGATTGATAAGCAAGGGAACGGTTCTGTCCGGTTGCAAGGCGATAATGTTGAGAGGAAGAGGGAGAGAATGGAGTGTGTTGTTGCTGCTCAACAACATCCGGGGGCTGGTAGTGTTCCCAAGGCCATGGAAGGGGAGCAGGTTGCAGCTGGATGGCCATCCTGGCTGGCAGCAGTGGCTGGAGAGGCTATCAAGGGATGGTTGCCGCGCCGTGCCGATTCTTTCGAGAAGCTGGATAAAATTGGACAAGGAACTTATAGTAATGTTTATAGGGCTTGTGATCTTGAGCAAAAGAAAATTGTTGCTTTGAAAAAAGTGAGGTTTGATAATCTTGAGCCAGAGAGTGTTCGCTTCATGGCAAGGGAAATCCACATTCTACGCAGGCTTGATCATCCAAATGTCATAAAACTGGAGGGCCTGGTTACATCAAGGATGTCTTGCAGCTTATACCTAGTTTTTGAATACATGGAGCATGATTTGGCTGGGCTTGCATCACATCCTGGACTGAAGTTTACAGAAGCACAGGTAAAATGTTACATGCAGCAACTTTTACGTGGACTTGACCACTGCCACAGCTGTGGTGTGCTGCACCGTGACATTAAGGGTTCCAACCTGTTGATTGACAACAATGGAATCTTGAAGATTGCAGACTTTGGTTTGGCAAGTGTTTTCGATCCAAATCAAACTCAGCCTTTGACAAGCCGAGTTGTCACTCTTTGGTATCGCCCACCAGAGCTTTTACTTGGTGCCACATACTATGGTACTGCTGTAGATTTATGGAGTACTGGTTGTATACTTGCTGAGCTGTATACTGGCAAACCTATAATGCCTGGAAGAACTGAGGTGGAGCAGTTACATAAAATTTTTAAACTTTGTGGTTCACCTTCTGAGGATTATTGGAGAAAATCAAAGTTGCCTCATGCAACAATATTTAAGCCCCAACAACCCTATAGGCGTTGTGTTGCTGACACATTCAAGGATTTCCCTGCACCTGCTTTAGCACTCATGGAGACTCTTTTGTCCATAGATCCTGCTGATCGTGGAACTGCAGCATCTGCTTTGAAGAGTGAGTTTTTCACAACAAAGCCACTACCTTGTGATCCTTCAAGTTTGCCAAAGTATCCTCCTAGCAAAGAGTTTGATGCCAAACTACGGGATGAACAAGCAAGAAGCAGACAAGGGGCAACAGGAAGCAAGGGCCAGAGACATGACCTTGAAAGAAGAGGCACAAGAGAATCTCGAGCTGTTCCTGCACCTGATGCCAATGCTGAACTGCCACTGTCAATGCAGAAGAGACAAAGTCAGGCTCAATCTAAAAGCAGAAGTGAGAAGTTTAATCCTCATCCTGAAGAAGCTTCTGGATTTCCCATCGATCCCCCCAGACCATCACAAGCTGTAGAAGTAGGCTTAGAACCTCAGGTCCCGCAACATAAAAGAGCCTCCCATTCTGGTCCGCTGGCTCACCGAACTGCATGGGCTAAAGCTGGGAAGAACCAGGATGATGCTCCAAAAATTTCAGTTGGGGGCGATCTATCAACAATCTCAGGTTTAGTTGCAGCAAGGAGATCATTCAAGGACGTCTCTGAGTCGTCGATACAAAAGGATCAAAGGCATCATGTACAGCGCCAAGTAGGCACTTCCCAAAAGGAAGAAGGGAGAAGCAGCAACAAAGACCTAGTTCTTGTTGGTTATGGGTCAAAGGGCCATAAAATTCATTACTCTGGTCCATTGATAGTTCCATCAAGCAACATGGATCAGGTGTTGAAAGACCACGACCGCCAAATTCAAGAGGCGGTTAGACGGGCGCGTTTGGATAAGGCGAAAATGAGAAGGCTTCAAGCTGAAGGGAACCAGGCTATGTACGGACGCAATGTGCATTGTGCAGTGCTCTCTCCTGAGATTCTGGTGTCTGCTGCGGTTGAAATTTTAATATTTTTGAAAGGGTATAAAAAGGTTATTTTGATTATGAAAGTGTACAGTGCGCTGTCACATTAG 2172 0.4641 MGGVCCKPSAIEDSKESPRERLSSKAASLDSRVSRGASSRREEAYRVKDRYDGNDVRTALIDKQGNGSVRLQGDNVERKRERMECVVAAQQHPGAGSVPKAMEGEQVAAGWPSWLAAVAGEAIKGWLPRRADSFEKLDKIGQGTYSNVYRACDLEQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHPNVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFTEAQVKCYMQQLLRGLDHCHSCGVLHRDIKGSNLLIDNNGILKIADFGLASVFDPNQTQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYTGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATIFKPQQPYRRCVADTFKDFPAPALALMETLLSIDPADRGTAASALKSEFFTTKPLPCDPSSLPKYPPSKEFDAKLRDEQARSRQGATGSKGQRHDLERRGTRESRAVPAPDANAELPLSMQKRQSQAQSKSRSEKFNPHPEEASGFPIDPPRPSQAVEVGLEPQVPQHKRASHSGPLAHRTAWAKAGKNQDDAPKISVGGDLSTISGLVAARRSFKDVSESSIQKDQRHHVQRQVGTSQKEEGRSSNKDLVLVGYGSKGHKIHYSGPLIVPSSNMDQVLKDHDRQIQEAVRRARLDKAKMRRLQAEGNQAMYGRNVHCAVLSPEILVSAAVEILIFLKGYKKVILIMKVYSALSH 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00672 723 MobiDBLite consensus disorder prediction 586 616 - -
Pumo11g00672 723 Gene3D Transferase(Phosphotransferase) domain 1 217 457 - -
Pumo11g00672 723 Gene3D Phosphorylase Kinase; domain 1 121 216 - -
Pumo11g00672 723 CDD STKc_CDK9_like 134 418 - -
Pumo11g00672 723 Coils Coil 654 674 - -
Pumo11g00672 723 ProSiteProfiles Protein kinase domain profile. 134 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g00672 723 FunFam probable serine/threonine-protein kinase At1g54610 121 216 - -
Pumo11g00672 723 MobiDBLite consensus disorder prediction 1 46 - -
Pumo11g00672 723 PANTHER CELL DIVISION PROTEIN KINASE 132 424 - -
Pumo11g00672 723 MobiDBLite consensus disorder prediction 12 26 - -
Pumo11g00672 723 SUPERFAMILY Protein kinase-like (PK-like) 128 426 IPR011009 -
Pumo11g00672 723 MobiDBLite consensus disorder prediction 443 473 - -
Pumo11g00672 723 Pfam Protein kinase domain 134 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g00672 723 FunFam probable serine/threonine-protein kinase At1g54610 217 458 - -
Pumo11g00672 723 MobiDBLite consensus disorder prediction 486 501 - -
Pumo11g00672 723 SMART serkin_6 134 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g00672 723 ProSitePatterns Serine/Threonine protein kinases active-site signature. 254 266 IPR008271 GO:0004672|GO:0006468
Pumo11g00672 723 MobiDBLite consensus disorder prediction 443 569 - -
Pumo11g00672 723 MobiDBLite consensus disorder prediction 586 615 - -
Pumo11g00672 723 ProSitePatterns Protein kinases ATP-binding region signature. 140 163 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00672 Pumo-Chr11 23473755 23481986 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00672 126 476 Core Cell Cycle Gene Families AT5G10270 52.316 1.01e-119 366
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Pumo11g00672 Pkinase 1.8e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00672 - - gsj:114379228 1273.46