Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00659 ATGGAGTTTCAAAAACCTCTATGCCTCTTCTTGCTTCTTCTCACTCTTCTCTCAAGCTCCCAAGCCAACAAATTCAACGTTGGTGGAAGCCAAGGGTGGGTTCCAAACCCTTCCGAGAGTTACAACAATTGGGCTGGAAGAAACCGGTTCCAAATCAATGACACAATAGTTTTCAAGTACAAGAAGGGTTCGGACTCGGTGTTGGAAGTGAAGAAGGAGGATTATGACAAGTGCAACAAGACCAGCCCAATCAAGAAGTTTGAAAATGGTGACACCGAATTCAAGTTTGATCGATCGGGACCATTCTACTTTATTAGTGGAAAAGATGGGAATTGTGAAAAGGGTCAAAAATTAATCGTTGTCGTTTTGTCCCCAAGAACACCACCAAGACCGACACCACCACCAAAAAATTCACCTTCACCATCTCCAAAGCCAATTCCACCAACCGTATCGCCACCGTCGCCTATCTCACCGTCTCCGGCAGCCCAACCTCCGTCAACAACACCGTCTCCAAGAACACCACCAACACCGCCACCGCCACCAAAAAATTCACCTTCTCCATCTCCAAAGCCAATCCCACCAACCGTATCGCCACCGTCGTCATCACCATCGTTGTCGTCATTTATCTCACCGACTCCGGCAGTCCAACCTCCGTCAACAACACCGTCTCCGGCGAGTTCTCCGGTGCCGGCCGGAGGAGCTCCGGCGAAGTCTCCGGGACCGGCGACCACAACTCCGACTGGGTCTCCGGCGTACTCTCCTCCGGCACCGGCACCGGAGAGGGGGACTCCACCAACGTCACCGGGACCTTCTTCTCCGCCGGCACACTCTCCTCCGGCACCGGCACCGGAGACGGGGACTCCACCACCGTCACTGGGACCTTCTCCTCCGCCGGCGCCGTCGTCTAATGCAACATCGCCGTCGGGGAACAGTGGATTTTCTGTGGCTCCTTCAAACGTTTTGGTGTTTTCCGTTACAATTGTTGTTGGTGCTGCGTTGTTGCGTTATTGA 1011 0.5321 MEFQKPLCLFLLLLTLLSSSQANKFNVGGSQGWVPNPSESYNNWAGRNRFQINDTIVFKYKKGSDSVLEVKKEDYDKCNKTSPIKKFENGDTEFKFDRSGPFYFISGKDGNCEKGQKLIVVVLSPRTPPRPTPPPKNSPSPSPKPIPPTVSPPSPISPSPAAQPPSTTPSPRTPPTPPPPPKNSPSPSPKPIPPTVSPPSSSPSLSSFISPTPAVQPPSTTPSPASSPVPAGGAPAKSPGPATTTPTGSPAYSPPAPAPERGTPPTSPGPSSPPAHSPPAPAPETGTPPPSLGPSPPPAPSSNATSPSGNSGFSVAPSNVLVFSVTIVVGAALLRY 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00659 336 Gene3D - 21 126 IPR008972 -
Pumo11g00659 336 PRINTS Proline rich extensin signature 121 137 - -
Pumo11g00659 336 PRINTS Proline rich extensin signature 174 190 - -
Pumo11g00659 336 PRINTS Proline rich extensin signature 153 174 - -
Pumo11g00659 336 PRINTS Proline rich extensin signature 141 153 - -
Pumo11g00659 336 PANTHER BLUE COPPER PROTEIN 24 190 IPR039391 GO:0009055
Pumo11g00659 336 CDD OsENODL1_like 24 123 IPR041846 -
Pumo11g00659 336 MobiDBLite consensus disorder prediction 126 200 - -
Pumo11g00659 336 MobiDBLite consensus disorder prediction 248 303 - -
Pumo11g00659 336 Pfam Plastocyanin-like domain 33 116 IPR003245 GO:0009055
Pumo11g00659 336 ProSiteProfiles Phytocyanin domain profile. 23 124 IPR003245 GO:0009055
Pumo11g00659 336 MobiDBLite consensus disorder prediction 124 317 - -
Pumo11g00659 336 FunFam Early nodulin-like protein 1 22 127 - -
Pumo11g00659 336 SUPERFAMILY Cupredoxins 22 123 IPR008972 -
Pumo11g00659 336 MobiDBLite consensus disorder prediction 215 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00659 Pumo-Chr11 23191028 23192742 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00659 3 189 Phytocyanin Superfamily AT5G53870 50.000 3.28e-59 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00659 - - gmx:100795901 238.424