Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00648 ATGACGGGCAAAGAAATTTTTCACAAGATGAAGGAAAAAGTTTTGGGCTCATCTGATCCTGATTCAGGTAAAGGAAAGAGCAAGATGAAGAAGCACATAACTCATGGCTTTCATTTGGTAAAGGGAAGATCAGGTCATGACATGGAAGACTATCTTGTTGCTCAATTTAAGCAAGTTGACAACAATGAGTTGGGTTTATTTGCAATATTTGATGGCCACTCAGGTAGCAGTGTACCTGATTACTTGAAGTCTCATTTGTTTGATAATATCTTGAAAGAGCCTAACTTCTGGACAGAACCTGCTGAGGCTGTTAAGAGAGCATATAGTAGAACTGATTCTACTATTTTAGACAAATCAGGTGAATTGGGTAGAGGGGGTTCAACTGCGGTTACAGCAATATTGATCAACTGTCAGAAGCTACTAGTGGCCAACATTGGGGATTCCCGGGCTGTCTTATGCAAGAATGGCGTGGCCAAACAACTATCAGTGGATCATGAACCAAGTGTAGAAAGTGAGGATATCAAAAACAGGGGTGGTTTTGTGTCAAACTTTCCAGGGGATGTGCCACGTGTCGATGGTCAGTTGGCAGTGTCAAGGGCATTTGGTGACAAAAGCCTGAAGATACATTTGAGCTCAGAACCATATGTAACTGTGGAGATGATAGAAGATGATGCAGAGTTTCTTATACTAGCCAGTGATGGGTTATGGAAGGTAATGTCAAATCAAGAAGCAGTTAATGCTATCAAAGATGTTAAGGATCCTCGGTCTGCAGCAAAGGTCCTTACTGAAGAAGCACGGAACAGGAAAAGCTCAGATGATATCTCATGCGTTGTTGTGAAATTTCAGTGA 849 0.4158 MTGKEIFHKMKEKVLGSSDPDSGKGKSKMKKHITHGFHLVKGRSGHDMEDYLVAQFKQVDNNELGLFAIFDGHSGSSVPDYLKSHLFDNILKEPNFWTEPAEAVKRAYSRTDSTILDKSGELGRGGSTAVTAILINCQKLLVANIGDSRAVLCKNGVAKQLSVDHEPSVESEDIKNRGGFVSNFPGDVPRVDGQLAVSRAFGDKSLKIHLSSEPYVTVEMIEDDAEFLILASDGLWKVMSNQEAVNAIKDVKDPRSAAKVLTEEARNRKSSDDISCVVVKFQ 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00648 282 Pfam Protein phosphatase 2C 46 274 IPR001932 -
Pumo11g00648 282 SUPERFAMILY PP2C-like 29 281 IPR036457 -
Pumo11g00648 282 CDD PP2Cc 35 281 IPR001932 -
Pumo11g00648 282 FunFam Probable protein phosphatase 2C 39 24 282 - -
Pumo11g00648 282 SMART PP2C_4 24 279 IPR001932 -
Pumo11g00648 282 PANTHER PROTEIN PHOSPHATASE 27 281 IPR015655 GO:0004722|GO:0006470
Pumo11g00648 282 ProSiteProfiles PPM-type phosphatase domain profile. 34 281 IPR001932 -
Pumo11g00648 282 Gene3D - 24 282 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00648 Pumo-Chr11 22771231 22775339 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00648 1 282 PP2C-type Phosphatase Gene Family AT3G15260 76.125 1.18e-163 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00648 K17506 - gmx:100787942 523.087