Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00646 ATGGCTGAGATAGCAGGTCTGGCTGAGGCTGCAGGGGCAAGATTTAGTTCATTGGAGCTCATTGGGCAGGGATCATTCGGCGACGTGTATAAAGGGTTTGACAAGGAGCTCAACAAAGAAGTTGCTATAAAAGTGATTGATTTGGAAGAATCAGAGGATGAAATTGAGGACATTCAGAAGGAAATTTCTGTTCTGTCACAATGTCGATCTCCATACATTACTGAGTATTATGGTTCCTTTCTTAATCAAACTAAACTTTGGATAATAATGGAATACATGGCTGGAGGCTCTGTTGCTGATCTAGTAGCTCCAATCAGGTCCTCCACTTGA 330 0.4212 MAEIAGLAEAAGARFSSLELIGQGSFGDVYKGFDKELNKEVAIKVIDLEESEDEIEDIQKEISVLSQCRSPYITEYYGSFLNQTKLWIIMEYMAGGSVADLVAPIRSST 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00646 109 SUPERFAMILY Protein kinase-like (PK-like) 13 102 IPR011009 -
Pumo11g00646 109 Coils Coil 41 68 - -
Pumo11g00646 109 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 11 103 - -
Pumo11g00646 109 Pfam Protein kinase domain 16 103 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g00646 109 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Pumo11g00646 109 Gene3D Phosphorylase Kinase; domain 1 2 92 - -
Pumo11g00646 109 ProSiteProfiles Protein kinase domain profile. 15 109 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00646 Pumo-Chr11 22707462 22712457 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00646 1 102 MAP Kinase Kinase Kinase Kinase AT3G15220 87.255 1.80e-50 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-YSK Pumo11g00646 Pkinase 2.4e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00646 K08838 - gmx:100786501 184.111