Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00617 ATGGTGGGCTCAGGAACAACAACAACAGATAGGAGCAAAGAAGCTGTTGGGATGATGGCCCTTCACGAGGCCCTCAGAAGTGTGTGTCTCAACTCAGATTGGACTTACTCTGTCTTCTGGACCATTCGTCCTCGCCCAAGAGTGAGAGGTGGCAATGGGTGCAAGGTTGGGGATGATAGCGGCAGCTTGATGTTGATGTGGGAAGATGGGTTTTGCCGTGGAAGGGTCTCAGATTGTTTGGAAGAGATTGATGGAGAGGATCCTATCAGGAAATCTTTTAGCAAAATGTCCATTCAGTTATATAATTATGGAGAAGGGTTGATGGGAAAGGTTACATCTGATAAGTGTCACAAATGGGTCTTCAAAGAGCCGACAGAATGTGAACCTAATATCTCCAACTACTGGCAGAGCTCCTTTGATGCTCTTCCTCCTGAATGGATAGATCAGTTTGAGTCAGGCATTCAGACAATCGCTGTGATTCAAGCTGGGCATGGCCTTCTGCAACTTGGTTCTTGCAAGATTATTCCTGAAGACCTCCATTTTGTGCTAAGAATGAGACACACTTTTGAATCTCTAGGCTATCAATCCGGGTTCTACCTCTCTCAACTCTTCTCTTCCACTAGGAGCACATCCTCTTCCACTTCCCTTCCTTCAAAACCATCCACCATTCCAATTAGGCCACCCCCTCCACTCCTCAACTGGGGTCAGAGGCCACTTGGGTCTGCTACTTCTATGCTACCCTCTACCACCTTTCAACATGCACCCAGAATGGGGTTCCCACAGGCCAAAGATGAGACCCATATGTTCCTCATGCCTCATGCATCAGAACATGCAAGAATGGGAGACATCATGGGGGAACATGAAAATGACATAAAGTGGCCTAATGGCCTATCCATTTTCAATGCACTCACTGGAAGATCTGATGATGCCAAACTCTTGTTCAATCAAGAGAGCCTGGCGAGCAAACCAGGTGATCACAATTACCACCACTCTCTCAACCCAAATCCCACCTCAGCAGTGCAAAATGCCAGTGTGGCAAACCCAAATGAGTTCTTGAGCTTGGATGGCCACACTGAAGGGGCAAGGAAAGTGGACAAGTTTAAGAGGTGCTTCACTCTACCTGCTAGAGTGGCCTCATCTTCATCTTCTACTTCAATGGATCACCATCAACAGCAAGCAGGTGGGGAGTATAGGAATTCAGAAGGAGGCATGTACCAGGATGTCATGGAGACCTTTTTGGAGTGA 1245 0.4731 MVGSGTTTTDRSKEAVGMMALHEALRSVCLNSDWTYSVFWTIRPRPRVRGGNGCKVGDDSGSLMLMWEDGFCRGRVSDCLEEIDGEDPIRKSFSKMSIQLYNYGEGLMGKVTSDKCHKWVFKEPTECEPNISNYWQSSFDALPPEWIDQFESGIQTIAVIQAGHGLLQLGSCKIIPEDLHFVLRMRHTFESLGYQSGFYLSQLFSSTRSTSSSTSLPSKPSTIPIRPPPPLLNWGQRPLGSATSMLPSTTFQHAPRMGFPQAKDETHMFLMPHASEHARMGDIMGEHENDIKWPNGLSIFNALTGRSDDAKLLFNQESLASKPGDHNYHHSLNPNPTSAVQNASVANPNEFLSLDGHTEGARKVDKFKRCFTLPARVASSSSSTSMDHHQQQAGGEYRNSEGGMYQDVMETFLE 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00617 414 MobiDBLite consensus disorder prediction 209 232 - -
Pumo11g00617 414 MobiDBLite consensus disorder prediction 379 401 - -
Pumo11g00617 414 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 21 75 IPR025610 -
Pumo11g00617 414 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 90 189 IPR025610 -
Pumo11g00617 414 PANTHER GB|AAF34833.1 1 414 IPR044170 -
Pumo11g00617 414 MobiDBLite consensus disorder prediction 379 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00617 Pumo-Chr11 21603710 21607588 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00617 22 192 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 31.977 3.38e-19 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00617 - - gmx:100789006 758.444