Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00612 ATGTCAATTGCTTGCATTCTACGTGATTTGCTTCATGCGATTGATTACCTACATAATGAAGGAAAAATTCATAGAGACATTAAAGCTGCAAACATTTTATTGACTGAGAATGGTGATGTAAAGGTTGCAGATTTTGGTGTTTCTGCACAATTAACAAGAACTATATCAAGGAGAAAAACCTTTGTAGGAACACCATTTTGGATGGCACCCGAGGTTATTCAAAATTCAGATGGATATAATGAGAAGGCAGATATCTGGTCTCTGGGCATTACTGCAATAGAGATGGCAAAAGGGGAGCCTCCACTTGCTGATCTTCATCCAATGAGAGTGCTTTTCATCATACCCCGAGAGAATCCACCACAACTAGATGAACACTTTTCTCGCTATATGAAAGAATTTGTTTCATTGTGCTTGAAGAAGGTTCCTGCTGAGAGGCCAAGTGCTAAGGAGCTTCTTAGACATCGTTTCATTCGAAATGCTAGGAAGAGTCCAAAGCTACTGGAGAGAATAAGGGAGCGTCCAAAGTTCCAAATAAAGGAAGATCAGGAGACACCTAGAAATGCTCCAAGGGGGATGGGGGAGGCATCTGATACTATTAAGGTTGCAAAAGATTTAAGGGGTGACGAAACTAATCAGCCTAGTGGCCAAGGTAAAACCCTGAGAAGTTCTGGGTGGGACTTCAGCATTGGTGGATCACAGGGTACTGGAACCTTTCGTAATGTGTCACGGCCACCTCAGTTTAGAGATAAGAAAACTGAAGTTTCGAATCATCAGCTTAACCAAAGAAAAAGTCCAGAGAGTGGCTATCAAGGGGGATCTGGCAATAAAAGTGCACTTAATGAGTCGCTAGAAACTTCTTTTGGAAAAGATCTTGGAGTTCCCTACCATTATGAACATCCCGATAATCACCTTGAAGATCAGGATGAATTGTCTCGGAATGGATCAGGAACTGTTGTTATTCGGTCTCCAAAAGGACCACAGCCTTCACTGTTTCATGACCCAAGTTCCCGGTCTAGCAGCAGCTATGCTTCTTTTGAAGATGTTTCTACTAGCGGAACTGTTGTTTTGCGTAGCCAGCACGATGATTCTGATTCTCCACAAACACCAAGGTCCCGACTGGGACTTAATAGCAGAAATTCAAATGCCTCACTGGAAGATAGTGCTACAAATCTTGCTGAGGCAAAGGCTGCTATCCAAGGTGGATTAAGGAAAGTGAATGTCCGGGAGAGATTTGCGCTGGGAAAACTCAACAATGATGTACAGGATAGCAGAAGAGATCAAATGTCAACCAGCTCTGATTCTTCCAGACCATCTCGTGAATACTTTGATGCACAAAAGGGATTTTCAAGATCACATTATTCTATTGATGATGAAGAAAGTGCCAAAATAATCTCATCCTCTGTGCCGTTACAAGTTTTGCTTATTCCTTCATTAAAAGAGGCCATTGCTGATGATCCAGACGGGTCAATAGTGCAAATTGTTATCGATGCTCTTGTAAACATGGAGAGGACAAAGCCCCAATCCTGTGATGTTCTTGTCAAAAAGTTGCTTCAGCAGTTGGCAAGGGCTGAAATTGAAGAATCAGTGATTGGGAAAGGGAAAAGGGGGAAAGGGAAGAAGCACCTGAAAGAGGGAGTTGAGCGTGAAATTTCAATGTCCTGGAGTTGTGTTAGAATTTGA 1680 0.4232 MSIACILRDLLHAIDYLHNEGKIHRDIKAANILLTENGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQNSDGYNEKADIWSLGITAIEMAKGEPPLADLHPMRVLFIIPRENPPQLDEHFSRYMKEFVSLCLKKVPAERPSAKELLRHRFIRNARKSPKLLERIRERPKFQIKEDQETPRNAPRGMGEASDTIKVAKDLRGDETNQPSGQGKTLRSSGWDFSIGGSQGTGTFRNVSRPPQFRDKKTEVSNHQLNQRKSPESGYQGGSGNKSALNESLETSFGKDLGVPYHYEHPDNHLEDQDELSRNGSGTVVIRSPKGPQPSLFHDPSSRSSSSYASFEDVSTSGTVVLRSQHDDSDSPQTPRSRLGLNSRNSNASLEDSATNLAEAKAAIQGGLRKVNVRERFALGKLNNDVQDSRRDQMSTSSDSSRPSREYFDAQKGFSRSHYSIDDEESAKIISSSVPLQVLLIPSLKEAIADDPDGSIVQIVIDALVNMERTKPQSCDVLVKKLLQQLARAEIEESVIGKGKRGKGKKHLKEGVEREISMSWSCVRI 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00612 559 MobiDBLite consensus disorder prediction 258 284 - -
Pumo11g00612 559 FunFam Serine/threonine-protein kinase PAK 6 1 177 - -
Pumo11g00612 559 MobiDBLite consensus disorder prediction 357 386 - -
Pumo11g00612 559 MobiDBLite consensus disorder prediction 168 187 - -
Pumo11g00612 559 MobiDBLite consensus disorder prediction 168 345 - -
Pumo11g00612 559 MobiDBLite consensus disorder prediction 294 310 - -
Pumo11g00612 559 Gene3D Transferase(Phosphotransferase) domain 1 1 191 - -
Pumo11g00612 559 MobiDBLite consensus disorder prediction 423 438 - -
Pumo11g00612 559 MobiDBLite consensus disorder prediction 418 442 - -
Pumo11g00612 559 SUPERFAMILY Protein kinase-like (PK-like) 3 158 IPR011009 -
Pumo11g00612 559 MobiDBLite consensus disorder prediction 329 345 - -
Pumo11g00612 559 ProSiteProfiles Protein kinase domain profile. 1 157 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g00612 559 SMART serkin_6 1 157 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g00612 559 MobiDBLite consensus disorder prediction 209 242 - -
Pumo11g00612 559 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 2 525 - -
Pumo11g00612 559 Pfam Protein kinase domain 6 157 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00612 Pumo-Chr11 21522962 21530058 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00612 2 521 MAP Kinase Kinase Kinase Kinase AT3G15220 61.686 0.0 626
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-YSK Pumo11g00612 Pkinase 8.3e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00612 K08838 - gmx:100786501 946.806