Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00572 ATGCATGGACTAGAGTCACAATTGCTAGAAGTAAAGTCGCTTCTGGATGTTGGATCTGATGATGTCGTCCACATGGTAGGGATCCTTGGACTCGGTGCAGTAGGTAAATCAACACTTGTGGTTGCAGTGTGTAATTCCATTGCTGACCATTTTGAAGTTTTATGTTTCCTTGAAAATATGAGACAAACTTCAAACAAACTTGGGTTACAACATCTCCGAAGCACCCTTCTTTTTGAAACAGTTGGAGAGAAGGAAATTAAGTTAACAAGTGTCAAACAAGGAATTTCCCTAATACAACACAGGCTTCAGAAAAAGAAAGTTCTTTTGATTCTAGATGATGTTGACAAACGGCAACAGTTGCAGGTTGTTGGAAGACCTGATTGGTTTGGTCTTGGCAGTAGAGTGATCATCACGACTCGGGACAAACAGTTGCTAGCATGTCACGGTGTTAAAAGAACATATGAGGTGAAAGAGTTAAATGAGGAAGATGCTCTACTATTACTTAGATGGAAAGCATTCGAGTTGGAAAAAGTTGATCCAAGTTACAAGGATGTTTTGAATCGAGCAGTAACTTATGCTTCAGGCCTTCTTCCATTGGCTTTGGAAGTAATAGGTTCCAACTTATTTGGAAGAAGTATAAAACAATGGAAATCTGCTTTGGATCAATACGAAAGAATTCCTAATAAAGAAATCCAAGAGATACTTAGAGTATGA 714 0.3866 MHGLESQLLEVKSLLDVGSDDVVHMVGILGLGAVGKSTLVVAVCNSIADHFEVLCFLENMRQTSNKLGLQHLRSTLLFETVGEKEIKLTSVKQGISLIQHRLQKKKVLLILDDVDKRQQLQVVGRPDWFGLGSRVIITTRDKQLLACHGVKRTYEVKELNEEDALLLLRWKAFELEKVDPSYKDVLNRAVTYASGLLPLALEVIGSNLFGRSIKQWKSALDQYERIPNKEIQEILRV 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00572 237 Pfam NB-ARC domain 10 226 IPR002182 GO:0043531
Pumo11g00572 237 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 226 IPR044974 GO:0006952
Pumo11g00572 237 Gene3D - 1 152 IPR027417 -
Pumo11g00572 237 Gene3D - 158 237 IPR042197 -
Pumo11g00572 237 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 236 IPR027417 -
Pumo11g00572 237 PRINTS Disease resistance protein signature 194 208 - -
Pumo11g00572 237 PRINTS Disease resistance protein signature 101 115 - -
Pumo11g00572 237 PRINTS Disease resistance protein signature 25 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00572 Pumo-Chr11 20344533 20346357 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00572 3 211 WRKY Transcription Factor Family AT5G45050 33.491 6.44e-25 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00572 - - gmx:100784366 355.525