Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00571 ATGTTTCTGTCCAAGCCCATATATAACTTGTCTTCTTTCAGTGGTATGCCTTCAGGATTAAGATGCCTTCAACGTAACTTTCCTTGCAATCGCGGCACTGGAATCTATTACAACTTTTTGATCAATTGTGGTGGTCCTCAGATTGCATCTTCCAATGGAATTGTGTATGAAAATGATAGCGAGGAACTTGGTCCAGCTACATATTTTGTGACAGACACACAGAGGTGGGCAGTTAGTAATGTGGGGTACTTTAGTGGAAGCACCAACCTAACTAAGTATACAAGTTATGTGCCAAATCAATTCACTGGTACTTCAAATTCCAACATGTTCCAAACAGCACAGTTGTCTGCTTCATCATTGAGATATTATGGCTTGGGACTAGAAAATGGTAACTACAATGTGAGTCTCCAATTTTCTGAAAGCAAAATTCTGGATTCTGCCTCATGGAAAAGCATTGGGAGAAGAGTCTTTGATGTTTACATTCAGGGGAATCTTGTTTTAAAGGATTTTGATATACAAAGGGAAGCTGGGAAGGTGTCTTTCAAAGCTGTTCCAAAGGAATTTAGAGCTCAAGTATTGGAAAACTACCTTGAGATCCACTTTTTTTGGGCTGGAAAAGGGACTTGTTGTATACCTGATCAATTTACTTATGGACCCTTAATTTCAGCCATCAGTGCAACCCCAGATTTCACTCCCTCTATTAGTAATAAGCCTTCAACCAATAAGAAGAAAAGGACTAGTCTGAAAGTGGGAGTAGCTCTTGGCATTGGAGTTTTAAGCATTATTTCTATTTTTGTGGTTTATTTCATTATTCGAAGAAGACGAAGACATCATGTTGATGAAATTGAAGAGCTCTTGGGTATTGAAGCTACACCATACACTTTTAGTTACTCTGTGTTAAAGGATGCCACAAATGACTTTGATTCTGCCAATAAGCTTGGAGAAGGTGGATTTGGCCCTGTTTATAAGGGGACACTTAATGATGGAAGAGTGATTGCTGTTAAACAACTATCTACACAATCTCGTCAAGGAAACTCAGAGTTCATAACTGAGATTGCTACTATTTCAGCAGTGCGACATCGCAACCTTATTAAGTTACATGGATGCTGCATTGAGAGGGATAAACGACTTCTTGTTTATGAGTATTTAGAAAATGGGAGTCTCAATCAACTACTATTTGGTATGGGCATTTCAATCCTCAATTGGCCAATGCGGTTTGGTATCTGCCTGGGCATTGCACGAGGCCTAAATTATCTCCACGAAGAATCACAGCTACGTATAATTCATCGTGACGTGAAGACTAGTAATATTCTAGTTGACCATCAATTTGTCCCTAAAATATCAGATTTTGGTTTGGCTAAGCTATTTGATCAAGAAAAAACCCACTTAAGTACTAATCTTGCCGGGACAATGGGATATTTGGCACCGGAGTATGCCTGGTGTGGGTACCTTACAGAGAAAGCAGATGTATTTTCCTTTGGTATTGTAGCTCTAGAGATTGTTAGTGGAAGGTTGAATTCGAATTTTTTCTTGGACACTGAAGAAAAAGAGACGTTTCTTCTAGAATGGGCGTGGAACCTTCACATGAACAACAATGAAATTGAGTTGGTGGATTCTAGACTGCAAGAGTTTGATGAGACTGAAGTGAAACGTGTAGTTAGCGTTTCTCTATTGTGCACACAATCCTCACCTTTCACACGACCATCCATGTCCCGTGTAGTGGCAATGCTTTCTGGTGATGTTGAAGTGACTCGCGTAACATCAATGCCTGAGTACTTGGCTTATATAAAGTCTGATGATGTAACTGATTTGATGAATACAAGAAATGGAACAAATGTGAGTCACCACACACATTAG 1857 0.3947 MFLSKPIYNLSSFSGMPSGLRCLQRNFPCNRGTGIYYNFLINCGGPQIASSNGIVYENDSEELGPATYFVTDTQRWAVSNVGYFSGSTNLTKYTSYVPNQFTGTSNSNMFQTAQLSASSLRYYGLGLENGNYNVSLQFSESKILDSASWKSIGRRVFDVYIQGNLVLKDFDIQREAGKVSFKAVPKEFRAQVLENYLEIHFFWAGKGTCCIPDQFTYGPLISAISATPDFTPSISNKPSTNKKKRTSLKVGVALGIGVLSIISIFVVYFIIRRRRRHHVDEIEELLGIEATPYTFSYSVLKDATNDFDSANKLGEGGFGPVYKGTLNDGRVIAVKQLSTQSRQGNSEFITEIATISAVRHRNLIKLHGCCIERDKRLLVYEYLENGSLNQLLFGMGISILNWPMRFGICLGIARGLNYLHEESQLRIIHRDVKTSNILVDHQFVPKISDFGLAKLFDQEKTHLSTNLAGTMGYLAPEYAWCGYLTEKADVFSFGIVALEIVSGRLNSNFFLDTEEKETFLLEWAWNLHMNNNEIELVDSRLQEFDETEVKRVVSVSLLCTQSSPFTRPSMSRVVAMLSGDVEVTRVTSMPEYLAYIKSDDVTDLMNTRNGTNVSHHTH 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00571 618 Gene3D Phosphorylase Kinase; domain 1 269 382 - -
Pumo11g00571 618 SUPERFAMILY Protein kinase-like (PK-like) 289 577 IPR011009 -
Pumo11g00571 618 Pfam Malectin domain 39 224 IPR021720 -
Pumo11g00571 618 SMART serkin_6 307 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g00571 618 FunFam Leucine-rich repeat receptor-like protein kinase 276 382 - -
Pumo11g00571 618 FunFam Leucine-rich repeat receptor-like protein kinase 36 228 - -
Pumo11g00571 618 Gene3D Transferase(Phosphotransferase) domain 1 383 590 - -
Pumo11g00571 618 CDD STKc_IRAK 313 577 - -
Pumo11g00571 618 ProSiteProfiles Protein kinase domain profile. 307 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g00571 618 Pfam Protein kinase domain 309 522 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g00571 618 ProSitePatterns Serine/Threonine protein kinases active-site signature. 427 439 IPR008271 GO:0004672|GO:0006468
Pumo11g00571 618 Gene3D - 37 228 - -
Pumo11g00571 618 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 12 596 - -
Pumo11g00571 618 FunFam Putative LRR receptor-like serine/threonine-protein kinase 383 589 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00571 Pumo-Chr11 20306074 20332281 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00571 18 602 Receptor kinase-like Gene Family AT1G56120 61.197 0.0 747
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo11g00571 Pkinase 1.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00571 - - vvi:109121540 805.438