Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00540 ATGGAAGTTGATGCAACAATGATGATGGGTGTTGGATTTTGTATTGCATTTCTTATCATAGTCCTAACGAAAGCACTGAGTTGGCTGTGGCTGGAGCCAAAAAGGGCAGAGAGATACCTCAGAAGACAAGGCCTAAAGGGAAACTCATACACGCTTTTCTTTGGAGACATCAAAGCAATTTCTAGGATGATACAGAAAGCAAAATCTAAGCCCATAAACATCAACGATGATATTGCACCTCGCCTAGTTCCCTTTCAACATCAATTGATAAAAGATTATGGTAAGAATTCGTTTTTTTGGTATGGGCCGAAGATTACAGTGAATATTATGGACCCTGAAGCAATAAAAGAGGTTCTCAACATGATAAATGACTTTCCAAAGCCAACCCTTACTCCACTTTCCAAGTTCCTGATAACCGGACTTGTATACCTTGAGGGTGACAAATGGTCAAAGCACAGAAAGATAATCAACCCTGCATTTAATCTTGTCAAGCTCAAGCTTCTATTGCCTGCTATGTATCATAGTTGTAACCAGATGATCAACGAATGGAAGATGTTAGCATCCGAAAAAGGATCATGCATGGTAGATGTTTGGCCCTTCTTAAATAGCTTAACAGGTGATGTGATTTCTCGTACGGCTTTTGGAAGTTGCTATGAAGAGGGAAAAATAGTATTTCAACTCCAAAAAGAACAAGCTGAACTTACAGCCAAGGTTCTACAGTCTGTTTATATTCCAGGATGGAGGTTTGTACCAACTAAATTGAACAAGAGGATGAAGGAGATTGATTTTGAAATTCGAAACGTACTTAGTGGAATTATCCAAAAACAGGAAGCAGCTATGAAGACATGCGAAGCTCCAAATGATAACCTATTAGGATTATTATTGGAATCCAATCAAAAAGAGATTGAAGATCGTGGACATAGAAAGGATGTTGGAATGAACACCGATGATGTAATTAATGAGTGCAAGTTATTTTACTTTGCTGGACAAGAAACAACATCGGTGCTACTTAATTGGACAATGGTGTTATTAAGTAGGTTTCCCAATTGGCAAACACTAGCAAGAGAAGAGGTCATCGAAATTTTTGGCACAACAGAACCAGACTATGATGGATTAAATCGTCTAAAAGTTGTCACAATGATTTTGTATGAGGTTCTAAGACTATACCCACCAGTCACTGCTATTACAAGAGTCGTAAGAAAGGAAGCTAGAGTTGGAAATGTGACTTTACCGGCTGGAGCATTTGCTACTATTCCAACCGTGTTGGTGCACCATGATTCTGAATTATGGGGCAGTGATGCAAAAGAGTTCAAACCAGAAAGGTTCTCAGAAGGGATCTTAAAAGCAACAAATGGTCAAGTTTCATTTCTCCCATTTGGATGGGGTCCCCGAATATGCATTGGACAAAACTTTGCTTTGCTTGAAGCCAAAATGGCTTTATGCTTGATTCTGCAGAACTTCTCATTTGAGATTTCACCATCATATGCTCATGCTCCATTTACAGTTATAACTGCTCAACCTCAATTTGGCACGCCTATTATATTACATAAATTATAG 1557 0.3873 MEVDATMMMGVGFCIAFLIIVLTKALSWLWLEPKRAERYLRRQGLKGNSYTLFFGDIKAISRMIQKAKSKPININDDIAPRLVPFQHQLIKDYGKNSFFWYGPKITVNIMDPEAIKEVLNMINDFPKPTLTPLSKFLITGLVYLEGDKWSKHRKIINPAFNLVKLKLLLPAMYHSCNQMINEWKMLASEKGSCMVDVWPFLNSLTGDVISRTAFGSCYEEGKIVFQLQKEQAELTAKVLQSVYIPGWRFVPTKLNKRMKEIDFEIRNVLSGIIQKQEAAMKTCEAPNDNLLGLLLESNQKEIEDRGHRKDVGMNTDDVINECKLFYFAGQETTSVLLNWTMVLLSRFPNWQTLAREEVIEIFGTTEPDYDGLNRLKVVTMILYEVLRLYPPVTAITRVVRKEARVGNVTLPAGAFATIPTVLVHHDSELWGSDAKEFKPERFSEGILKATNGQVSFLPFGWGPRICIGQNFALLEAKMALCLILQNFSFEISPSYAHAPFTVITAQPQFGTPIILHKL 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00540 518 PRINTS E-class P450 group I signature 204 222 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo11g00540 518 PRINTS E-class P450 group I signature 337 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo11g00540 518 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo11g00540 518 PRINTS E-class P450 group I signature 420 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo11g00540 518 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo11g00540 518 PRINTS E-class P450 group I signature 317 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo11g00540 518 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo11g00540 518 PRINTS P450 superfamily signature 328 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo11g00540 518 PRINTS P450 superfamily signature 380 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo11g00540 518 PRINTS P450 superfamily signature 466 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo11g00540 518 Gene3D Cytochrome P450 29 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo11g00540 518 SUPERFAMILY Cytochrome P450 81 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo11g00540 518 CDD CYP72 83 514 - -
Pumo11g00540 518 PANTHER CYTOCHROME P450 FAMILY MEMBER 21 510 - -
Pumo11g00540 518 FunFam Cytochrome P450 734A1 30 518 - -
Pumo11g00540 518 Pfam Cytochrome P450 86 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo11g00540 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00540 Pumo-Chr11 19261577 19266636 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00540 24 518 Cytochrome P450 AT3G14690 57.258 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00540 - - gmx:100780475 981.859