Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00537 ATGTACAAAGTCATAAACTACCCTAATGAGAATTCAGAAGAATTCGATATCTTGAAGGCTTACTACTATCACGTTGATGATAGGGTTTCTCAGGTGACTAAGGTGGAAGACCGTCGCGACTGTATCACCTCCATGGTCGAGGAGGCACTGATTAGAAAGAACGAACCTGTCCTTGGGAGTGTGGGGATCATTCGGGAACTCCGTTCCCAGCTCCAAAAATTGGAGTTGAAACTGGAATCCAAGAAGAGAAAAATTCAACCATTAAGAAAAAAGCTGGTAAAACACTAG 288 0.4271 MYKVINYPNENSEEFDILKAYYYHVDDRVSQVTKVEDRRDCITSMVEEALIRKNEPVLGSVGIIRELRSQLQKLELKLESKKRKIQPLRKKLVKH 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00537 95 Coils Coil 64 91 - -
Pumo11g00537 95 Pfam Lateral organ boundaries (LOB) domain 8 81 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00537 Pumo-Chr11 19215737 19216024 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pumo11g00537 LOB 3.2e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00537 - K15369 dcr:108227054 33.113