Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00534 ATGGTAATGCCTGGACATCGGGAATCAAACTTGCAGAAAGAACTGAACCGATACATTCCCACTGCTGCAGCATTTGGAGGCGTGTGTATTGGTGCCCTGACAGTGTTGGCAGATTTCATGGGTGCAATTGGTTCAGGGACAGGAATATTGCTTGCAGTAACAATCATCTATCAGTACTTCGAGACATTTGAGAAGGAGAGAGCTAGCGAGCTTGGCTTCTTTGGTTTCTAA 231 0.4589 MVMPGHRESNLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFGF 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00534 76 PANTHER SECY/SEC61-ALPHA FAMILY MEMBER 1 70 IPR002208 GO:0015031|GO:0016020
Pumo11g00534 76 SUPERFAMILY Preprotein translocase SecY subunit 1 66 IPR023201 -
Pumo11g00534 76 Gene3D SecY subunit domain 1 74 IPR023201 -
Pumo11g00534 76 Pfam SecY 1 59 IPR002208 GO:0015031|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00534 Pumo-Chr11 19127093 19127323 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00534 1 76 Miscellaneous Gene Families AT1G29310 98.684 4.11e-48 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00534 K10956 - gmx:100817566 154.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g00534 11 19127093 19127323 Pumo11g00534 11 19127093 19127323 ECH