Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00533 ATGATGAGTACCCCTGCTGTTCAACGCATTTCAGAATGCTTCATAAAGCCGCAGCACCCCATTGAAGACTCAAACCAAATCTACCATTTAACACCTTGGGATATTACTATGTTGTCTATGCACTATATCCAAAAGGGTCTCCTCTTCAAGAAGCCCTCACTACTTGATAATCAACAAGATTTCATCCAAAACCTATTGGATAAGATCAAGCACTCCCTTTCTCTTGCACTTAACCATTTCTATCCATTAGTTGGTCGCTTTGTGACCCACAAAACCCAAGGCCACCCTTCTTATGTTGTATTCATTGATTGCAAAAACAGCTGTGGAGCTAGTTTTATCTATTCCACATTGGATATGACCATATGTGACATCCTCTCCCTTATTGATGTCCCACCTATTGTTCACTCATTGTTTGACCATGACAAAGATGTGGTGAACCATGATGGTCACTCCATGCCATTGTTGGCCATCCAAGTCACTGAACTGGTGGATGGTGTTTTCATAGGTTGTTCCATGAACCACAGCATTGCTGATGGCACCTCTTTTTGGGATTTCTTCAACACATGGTCTGAGATATTTCAATTTCAAGCACAAGGGCATGCTGAACATGTCATTGATGTTCCCATTTCGCGCCAACCGGTTCTCAATCGCTGGTTTCCAGAGGGTTGTAGTCCTCCAATGAACCTCCCCTTCAAACATCATGATGAGTTTATTAGTAGATTTGAAGCACCTAAGCTGAGAGAGAGAATCTTCCACTTCACAGCAGAGTCTATTGCCAGATTAAAAACAAAGGCCAACATGGAGTCACAGTCAAAGAACCACCTGCATGTTAGCCGCGAACAACCGAACACGAATGGAACCACCACTGCCTCAGGAGTGTTTTGGAAACTGGGCTCAAGGGTTGAGAACAGGAGCAACAGCAGAAGAATTGTTGGATCAACTGATCTAGGATGGGCAGCATGGAAATTGCACTTGGCTGTTACAAACCATAATGACAAAGCAGTTAAACAAGCTCTTAAAGAGTGGTTGCAATCTCCTGTTGTGTATCAGCCACATGAGCGCTATGACCAATACACTGTGTTGTTTACTAGTTCACCAAGGTTCAACATGTATGGGAATGAATTTGGAATGGGGAAAGCAGTGGCAGTTCTAAGTGGCTTTGCCCTCAAATTTGATGGGAAAGTTACATCTTATCAAGGTTATGAAGGAGGGGGAAGCATAGATTTATCAGTGTGTCTTTTGCCTGAAAACATGCGTATGCTGGAATCAGACAAGGAGTTCATGAGTACGGTTTCTTTGTCCAAGTCTAATGCCCTATACTAG 1323 0.4301 MMSTPAVQRISECFIKPQHPIEDSNQIYHLTPWDITMLSMHYIQKGLLFKKPSLLDNQQDFIQNLLDKIKHSLSLALNHFYPLVGRFVTHKTQGHPSYVVFIDCKNSCGASFIYSTLDMTICDILSLIDVPPIVHSLFDHDKDVVNHDGHSMPLLAIQVTELVDGVFIGCSMNHSIADGTSFWDFFNTWSEIFQFQAQGHAEHVIDVPISRQPVLNRWFPEGCSPPMNLPFKHHDEFISRFEAPKLRERIFHFTAESIARLKTKANMESQSKNHLHVSREQPNTNGTTTASGVFWKLGSRVENRSNSRRIVGSTDLGWAAWKLHLAVTNHNDKAVKQALKEWLQSPVVYQPHERYDQYTVLFTSSPRFNMYGNEFGMGKAVAVLSGFALKFDGKVTSYQGYEGGGSIDLSVCLLPENMRMLESDKEFMSTVSLSKSNALY 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00533 440 Pfam Transferase family 7 297 - -
Pumo11g00533 440 Pfam Transferase family 311 428 - -
Pumo11g00533 440 Gene3D - 9 226 IPR023213 -
Pumo11g00533 440 Gene3D - 299 428 IPR023213 -
Pumo11g00533 440 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 10 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00533 Pumo-Chr11 19075705 19077113 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00533 49 422 Monolignol Biosynthesis Gene Families AT5G48930 24.766 7.57e-13 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00533 - - gmx:100795679 576.63