Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00532 ATGGTGAGGCTCAACTTGTTCATGCTTTGCTTATCTGCCTTGTTATATGCTGTTAATGCATTGAACACTGATGGGGTGGCTCTTCTGTCACTCCAGAGGCACTGGACATTTGTGCCTCCTCCCATAAACTCGAGTTGGAATGCTTCTGATTCCACTCCATGCTCTTGGTTAGGAGTCCAGTGTGACAATAACCACAATGCAATCTTTCTTAATCTCTCTGGATACTCAATTTCAGGGAAAATACCTCCTGAGTTAGGAAATTGTAGTCTGCTTGAGAACCTGAACCTTGCTGATAACAGCATCAGTGGTCAAATACCTGATAGTTTTAGAAACTTGCAGAATTTAGTGTCTTTAAACATTATGAACAATATGCTAACTGGTCAAATTCCTGAGTTCTTGTTTCAACTTCAACACTTGGAAGATCTTCTCCTGAGCCAAAACAATTTGACTGGTCCCATTCCAATGAATGTTGGGAACAGTACAGAAATTTTGAGGCTGTATCTGGATGCTAATCAGTTGTCAGGAAGGATTCCCCCATCCATTGGAAACTGCAGTAAATTAATGCAGCTGTATTTAGATCATAACCAGTTGCATGGAGTTCTACCTGAAAGTCTTAACAATCTCAAAAGTGTTGTTGTGTTAGGTGTCAACAATAATAGACTTGAGGGTAACATTCCACCATTGGGTTCTGGCAGATGTAACAATTTACATTATTTAGACCTGTCATTCAATAAATTTAGTGGAGGCATACCTTCAAGCTTGGGAAATTGCATCAGATTAACAGAATTTTATGCTCTCAACACAAATTTAGGAGGCAGCATCCCATCATCCTTGGGCCAACTAAGTGAGCTTTCTATTCTTCGCCTTGAATTCAATCATTTGACTGGACAAATACCTCCAGAAATTGGTAATTGTAGGTCCTTAAAAGTGTTGATGTTAAATAACAATGAACTTGAGGGAGAGATTCCAAGTAAATTAGGAATGCTAAGTCAATTGCAAGATCTTAGGCTTCATTACAACAATTTGACAGGTGGAATTCCAGTGAGCCTTTGGAAAATTCCTAGCCTTGAGTATGTGCATATGTATTACAATAACCTTTCTGGGGAGTTACCTTTAGAATTGGCAGAACTCAAACAATTGAAAAATATCACATTGTATAACAACCAATTCTCTGGAGTCATACCTCAAAACTTAGGAATCAATAGCAGTTTACAGCAGTTGGATGTCTCATATAATTACTTCACTGGCAAAATCCCACCTAATCTTTGCTTTGGACAGCAATTAGAAAGGCTAATCCTGGCTTCAAATCAATTTCAAGGTGGTATACCTCTTGACATAGGAAGGTGTACAACTCTTATGAGGTTGCGTCTTGATGGAAACAACTTAACAGGACCTCTACCTGACTTTACAAGCAATAGTAGTCTCACCTACATGGACATCAGTGTGAACAATATCAGTGGAGCAATTCCAACAAGTTTGGGAAACTGCACAAATCTTACTGATGTTATTTTGTCCCACAACAATTTTTCAGGGAACATACCCTTTGAGCTAGGAAGCCTTGTGAAACTTCAGAGGCTGAACCTTTCTCACAACAAGTTGGAAGGTCCTTTGCCACCTGAGCTGTCCAATTGTAACAAAATGGAATACTTTGATGCTGGATTCAATTCTCTAAATGGCTCATTCCCTTCAAGTTTGAGAACTTGGACAGGGTTGACCACATTAAATTTAAGGGAAAATCATTTCACTGGTGGTATCCCAACTTTCTTATCAGAATTTAAACACCTTTCTGATCTACATCTTGGAGGAAACGTTTTTGGAGGCCAAATTCCTAGATCAATTGGTGAGTTGCAGAATCTTCTTTATGAGTTGAATCTAAGTGCTAATGAGTTGACAGGTGAAATTCCTCCAGAGATTGGGAAACTGAAATTGCTGCAAAGCCTGGATATTTCTCTTAACAATCTGACTGGAAAAATTGAAGTTCTTGAAGATCTCTCTTCATTGGTTGCACTGAATATTTCATACAATTCCTTCTATGGTCCTCTTCCAGACAAAGTAGTGAACTTGCTCCATTCTTCTCCATCATCATTCTTGGGCAATCCTGGCTTATGTGTCAGATGTTTTCCATCACATGGGCTGAATTGTTCCAAAAATAACAGCTTGAAGCCATGTGATGAGAACAATTCCACACATCCAAAAGGGCTGAGTAAAATTAAAGTTGTGATGATAGCACTTGGATCCACACTACTTGTAACATTTTTGTCACTTGGTCTTGTTTATGTGCTACACTATAAGCAAGATGTCAAGATTTTCCCCGAACAGCAGTCATCTTTACTCAAAAAAGTGATGAAGGCTACAGAGAACCTAAATGATAGGTATATTATTGGAAGAGGAGCACATGGAGTTATATACAAAGTTGAATTCAGTCCAGACAAAGTTTTTGTCATAAAGAAAATACCCTTTGCAGATGACAAAGCTCAGATCACAAGCATGAGCACAGAGATTGAAACCACTGGGAAGATTAGGCATCGAAATCTGGTAAGAATAAAAAACTTCTGGTTAAGAAAGGACTGTGGTCTAATTCTGTACAAGTACATGGAAAATGGAAGTCTTCATGATGTTCTGCATGAGAAGTATCCACCACCATCTTTAGAGTGGAGTGTCCGCTACAAGATTGCTGTTGGAATTGCACATGGACTTGAATATCTCCATCATGATTGTGATCCTGTCATAGTGCACAGAGACATCAAACCAAATAATATACTTTTGGATTCTGATATGGAGCCTCGTATTGCTGATTTTGGTATTGCCACTCTTCTAGACCATTCCTCTACTTCATTGCAATCTCTCTTTGTTCCTGGTACAATTGGGTATATTGCACCAGAGAATACTAATCCAACAGTGATGAGTAGGAAGTCTGATGTGTATAGTTATGGAGTGGTTTTGCTAGAGCTGATAAGCAGAAAGAAGGTGCTAGATGATCCTTCATTTATGGAAGAAACAAATCTTGTGGGGTGGGTTAAATCTCTCTGGGAAAAAACAAGAGACATTGATTACATTGTTGACCTAAGCCTTAAAGAGGAACTTTTGGCCTCAAATGTGAGGGAACAAGTTGAACAAGTGCTTTTGGTGGCATTGAGATGTACTGAGAAGCATCCAGGTGAGAGACCAACAATGAGAGAAGTCGTCAAGGACTTGATAGTGAGATGCAAAGCTCCCGACATGAAGAGCTAG 3231 0.3912 MVRLNLFMLCLSALLYAVNALNTDGVALLSLQRHWTFVPPPINSSWNASDSTPCSWLGVQCDNNHNAIFLNLSGYSISGKIPPELGNCSLLENLNLADNSISGQIPDSFRNLQNLVSLNIMNNMLTGQIPEFLFQLQHLEDLLLSQNNLTGPIPMNVGNSTEILRLYLDANQLSGRIPPSIGNCSKLMQLYLDHNQLHGVLPESLNNLKSVVVLGVNNNRLEGNIPPLGSGRCNNLHYLDLSFNKFSGGIPSSLGNCIRLTEFYALNTNLGGSIPSSLGQLSELSILRLEFNHLTGQIPPEIGNCRSLKVLMLNNNELEGEIPSKLGMLSQLQDLRLHYNNLTGGIPVSLWKIPSLEYVHMYYNNLSGELPLELAELKQLKNITLYNNQFSGVIPQNLGINSSLQQLDVSYNYFTGKIPPNLCFGQQLERLILASNQFQGGIPLDIGRCTTLMRLRLDGNNLTGPLPDFTSNSSLTYMDISVNNISGAIPTSLGNCTNLTDVILSHNNFSGNIPFELGSLVKLQRLNLSHNKLEGPLPPELSNCNKMEYFDAGFNSLNGSFPSSLRTWTGLTTLNLRENHFTGGIPTFLSEFKHLSDLHLGGNVFGGQIPRSIGELQNLLYELNLSANELTGEIPPEIGKLKLLQSLDISLNNLTGKIEVLEDLSSLVALNISYNSFYGPLPDKVVNLLHSSPSSFLGNPGLCVRCFPSHGLNCSKNNSLKPCDENNSTHPKGLSKIKVVMIALGSTLLVTFLSLGLVYVLHYKQDVKIFPEQQSSLLKKVMKATENLNDRYIIGRGAHGVIYKVEFSPDKVFVIKKIPFADDKAQITSMSTEIETTGKIRHRNLVRIKNFWLRKDCGLILYKYMENGSLHDVLHEKYPPPSLEWSVRYKIAVGIAHGLEYLHHDCDPVIVHRDIKPNNILLDSDMEPRIADFGIATLLDHSSTSLQSLFVPGTIGYIAPENTNPTVMSRKSDVYSYGVVLLELISRKKVLDDPSFMEETNLVGWVKSLWEKTRDIDYIVDLSLKEELLASNVREQVEQVLLVALRCTEKHPGERPTMREVVKDLIVRCKAPDMKS 1076
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00532 1076 Coils Coil 644 664 - -
Pumo11g00532 1076 SUPERFAMILY Protein kinase-like (PK-like) 773 1066 IPR011009 -
Pumo11g00532 1076 Gene3D Ribonuclease Inhibitor 469 727 IPR032675 -
Pumo11g00532 1076 Pfam Protein kinase domain 793 1063 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g00532 1076 SUPERFAMILY RNI-like 347 697 - -
Pumo11g00532 1076 ProSitePatterns Serine/Threonine protein kinases active-site signature. 910 922 IPR008271 GO:0004672|GO:0006468
Pumo11g00532 1076 Gene3D Transferase(Phosphotransferase) domain 1 865 1072 - -
Pumo11g00532 1076 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 760 864 - -
Pumo11g00532 1076 SUPERFAMILY RNI-like 70 431 - -
Pumo11g00532 1076 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 426 711 - -
Pumo11g00532 1076 FunFam Serine/threonine-protein kinase-like protein CCR4 865 1076 - -
Pumo11g00532 1076 FunFam Inactive leucine-rich repeat receptor-like protein kinase 137 397 - -
Pumo11g00532 1076 FunFam Leucine-rich repeat receptor-like kinase 26 136 - -
Pumo11g00532 1076 Gene3D Phosphorylase Kinase; domain 1 760 864 - -
Pumo11g00532 1076 Gene3D Ribonuclease Inhibitor 135 228 IPR032675 -
Pumo11g00532 1076 SMART serkin_6 788 1067 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g00532 1076 SMART LRR_typ_2 184 207 IPR003591 -
Pumo11g00532 1076 SMART LRR_typ_2 377 401 IPR003591 -
Pumo11g00532 1076 SMART LRR_typ_2 616 641 IPR003591 -
Pumo11g00532 1076 SMART LRR_typ_2 112 136 IPR003591 -
Pumo11g00532 1076 SMART LRR_typ_2 329 353 IPR003591 -
Pumo11g00532 1076 SMART LRR_typ_2 281 305 IPR003591 -
Pumo11g00532 1076 SMART LRR_typ_2 520 544 IPR003591 -
Pumo11g00532 1076 Pfam Leucine rich repeat 620 676 IPR001611 GO:0005515
Pumo11g00532 1076 Pfam Leucine rich repeat 306 366 IPR001611 GO:0005515
Pumo11g00532 1076 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 526 1064 - -
Pumo11g00532 1076 ProSiteProfiles Protein kinase domain profile. 788 1067 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g00532 1076 Pfam Leucine rich repeat N-terminal domain 22 62 IPR013210 -
Pumo11g00532 1076 ProSitePatterns Protein kinases ATP-binding region signature. 794 817 IPR017441 GO:0005524
Pumo11g00532 1076 Gene3D Ribonuclease Inhibitor 24 134 IPR032675 -
Pumo11g00532 1076 Gene3D Ribonuclease Inhibitor 229 467 IPR032675 -
Pumo11g00532 1076 Pfam Leucine Rich Repeat 522 544 IPR001611 GO:0005515
Pumo11g00532 1076 Pfam Leucine Rich Repeat 235 257 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00532 Pumo-Chr11 19064149 19067720 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00532 12 1063 Receptor kinase-like Gene Family AT1G73080 49.177 0.0 970
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pumo11g00532 Pkinase 2.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00532 - - qsu:112010432 1326.23